Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20deminutivum_20[genbank_20GCA_5F900092275.1_202017- 01-02] 13,382 sequences; 45,801,537 total letters Query= NC_003278.1 Length=35580 Score E Sequences producing significant alignments: (Bits) Value seq12163 410 3e-110 seq9435 327 3e-85 seq3418 269 6e-68 seq2422 230 5e-56 seq1269 226 6e-55 seq3006 197 3e-46 seq7430 129 1e-25 seq7034 120 7e-23 seq6269 118 2e-22 seq4829 98.7 2e-16 seq5091 93.3 1e-14 >seq12163 Length=619 Score = 410 bits (454), Expect = 3e-110 Identities = 475/638 (74%), Gaps = 22/638 (3%) Strand=Plus/Plus Query 2872 TGTTCGGCGAAGTCCTTGCCGCGGAATTGATGGCGCTCCAGCACGCGGAACTTGCCGCCC 2931 || || ||||||||| |||| ||| || || ||||||||||||||||||||||| || Sbjct 1 TGGTCAGCGAAGTCCATGCCCTTGAACTGGTGACGCTCCAGCACGCGGAACTTGCCACCG 60 Query 2932 GGTACCGCCGGAGGCGCCACCACCACCAGACCCGCGGTGTCGCCCGTCTCGGCGGGGTCA 2991 || || || |||||||| | ||| | || ||| |||||||||||||||| ||||| Sbjct 61 GGCACTTGGGGCGGCGCCACAATCACGATGCCGGCGCTGTCGCCCGTCTCGGCCGGGTCG 120 Query 2992 TAGCCCAGCCACACCTGGCGATCACCGAACGGCCGCAGCGCGAACGGCTTGTAGTCCTCC 3051 || || | ||||||| ||| || || | || |||| ||||| || || | || | Sbjct 121 TACCCAATCCACACCGCGCGGTCGCCATATGGGCGCATGGCGAAGGGGCTGAACTCGCCG 180 Query 3052 GACCACAGGTCCCAGCTATCGACCATGCACGGCTGCAGCATGGTCAACGGGAAAATGCTC 3111 | |||| ||||||| || ||| ||||||||||||||| |||| |||||| | ||| Sbjct 181 GCCCACTCCACCCAGCTGTCCACCTGGCACGGCTGCAGCATCGTCAGCGGGAACACGCTG 240 Query 3112 GCGCCGTCGTCGACGAACTGGCACATCAGCAGGTTCTGGAAAGCCTCGGCGTCGTACTCG 3171 |||| |||||| ||||||| ||||||||||||||| ||| |||||||| || | Sbjct 241 GCGCTGTCGTCCACGAACTCGCACATCAGCAGGTTGGCGAATTCCTCGGCGCTGTNNCCA 300 Query 3172 AGACGCAGCTCGTCGATGTCGAACAGATCGCAGCCACGGGCCTCGGCATCGAGGATGGTG 3231 || |||||||||||||| || ||| | | || ||||| | ||| Sbjct 301 -----CA-----------TCGAACAGATCGCACCCTCGGTCGGCCGCGTCGAGCACTGTG 344 Query 3232 ACGATCTGGCGCCAGATGCGGTCCTCGCACAGTCGCCCT-TGCTGCAGGGCGTCATGACT 3290 |||||||| |||||||| ||||||||| |||| || ||| ||| | | || || Sbjct 345 ACGATCTGCCGCCAGATAGCGTCCTCGCAGCGTCGGCCACTGCC-CAGCCGGCCGTGGCT 403 Query 3291 TACGTCGATCTTGATGC--GATCGGCGGCCGGCTTGCCCTTGTTGAAGCGCTCGCCAGTC 3348 || |||||| ||| | | | || || ||||||||||||||||||||||||||| ||| Sbjct 404 GACATCGATC--GATACCTGCTGGGAGGTCGGCTTGCCCTTGTTGAAGCGCTCGCCTGTC 461 Query 3349 CAGAATGTGTAGGCCTCATGCGCCATCGAACTGGGCGTCGAGAAGTAGGTCCGGCGGTAG 3408 ||||| |||||| || |||||||| | ||||| |||||||||| ||| | Sbjct 462 CAGAAATCGTAGGCTTCGTGCGCCATGGTGGAAGGCGTGCTGAAGTAGGTCTTGCGCCAT 521 Query 3409 CGCTTCTGCATCGCCATACCGCTGGCGACCTTGTTCAGCTCCTTGAACTTGAACGTCCAG 3468 ||| ||||||||||| |||||||||||||||||||||| ||||| | | |||||| Sbjct 522 TTCTTGTGCATCGCCATGCCGCTGGCGACCTTGTTCAGCTGGTTGAAGCCGTAGGTCCAG 581 Query 3469 AAGAACTCGTCGAAGTAGAAGTTGCCGTGGTAGCCCTG 3506 ||||| |||||||||||||| || |||||||||||||| Sbjct 582 AAGAATTCGTCGAAGTAGAAATTCCCGTGGTAGCCCTG 619 >seq9435 Length=520 Score = 327 bits (362), Expect = 3e-85 Identities = 342/445 (77%), Gaps = 3/445 (1%) Strand=Plus/Plus Query 5826 CGGCGCCGACGCCGACTACAAGAACCTCGACGCCCTGGTGTTCGACGTGGTCAGCAGCCT 5885 |||||||| ||| |||||| ||||| ||||| ||||| | || ||||| || ||| Sbjct 73 CGGCGCCGGCGCGGACTACGCCAACCTGGACGCGCTGGTTATGGATGTGGTGTCCACCCT 132 Query 5886 GATCGATCCCTGGCACCGCCGTGACCCGGGCCTGGTGGTGATCCTCGGCCGCGAGCTGGT 5945 |||||| || ||||||| | || |||||| ||||||| ||||| |||||| | ||||| Sbjct 133 GATCGAGCCGTGGCACCAGCAGGATCCGGGCTTGGTGGTCATCCTGGGCCGCAACCTGGT 192 Query 5946 CCACGACAAGTACTTCCCGATGGTGAACAAGGACCAGCCGGCAACCGAGAAGATCGCCAC 6005 ||||||||||||||||| || | |||||||||| | || | |||||| || | ||| | Sbjct 193 GCACGACAAGTACTTCCCCATCATCAACAAGGACCTGGCGCCGACCGAGCAGCTGGCCGC 252 Query 6006 CGACCTCATCCTGTCGCA-GAAGCGCATGGGCGGCCTGCCGCCGGTGGAAGTGCCCTACG 6064 || || | ||| ||| |||||||| || ||||||| ||||||| ||||| | || Sbjct 253 GGATCTGGTGCTG-GGCACTAAGCGCATCGGTGGCCTGCAGCCGGTGATCGTGCCTTTCG 311 Query 6065 TGCCCGAGAAGGGCCTCATGGTCACCACCCTGAAGAACCTGTCGCTCTACTGGCAGATCG 6124 | || | || | ||| ||||||||| | ||| | || |||||| ||||||||||||||| Sbjct 312 TCCCGGCCAACGCCCTGATGGTCACCTCGCTGGACAATCTGTCGATCTACTGGCAGATCG 371 Query 6125 GCGGTCGCCGCCGCTACCTGAAGGAGGTACCGGAGAAGAACCGCATCGAGAACTACGAGT 6184 ||| |||||||| ||||| | ||| ||| ||||||||||| | | ||||| ||||| Sbjct 372 ACGGCCGCCGCCGTTACCTCATCGAGCAGCCGCAGAAGAACCGCGTGGCGAACTTCGAGT 431 Query 6185 CCAGCAACGACGCCTACGTCGTCGAGGACTACGGCCTCGGCTGCCTGGTCGAGAACATCG 6244 | |||||||| |||||| ||||| |||||||||| ||| ||||||||||||||||| Sbjct 432 CGTCCAACGACGACTACGTGGTCGAAGACTACGGCCGTGGCGCCCTGGTCGAGAACATCG 491 Query 6245 AAGTCGCGGAGTAGATGACATGGCC 6269 || ||| | || | ||||||| Sbjct 492 TGGTTCAGGACT-GACGCCATGGCC 515 >seq3418 Length=506 Score = 269 bits (298), Expect = 6e-68 Identities = 369/505 (73%), Gaps = 14/505 (3%) Strand=Plus/Minus Query 1565 TTCTGCGGCACCACCCCCATCAGCTGCGGATAGACCCGCAGGCCGGCGAGCTGGTCGTCG 1624 ||||||||||| | || | ||||||||| || ||||| | || ||| ||||||| Sbjct 502 TTCTGCGGCACGATGCCAAGCAGCTGCGGCGGCACGCGCAGCGCCGCCAGCATGTCGTCG 443 Query 1625 CGGCTGATGTTCTTGATTGAGCCGAACTCGTCCTTGGCCGCCACCTCGCTGACCGGAATC 1684 || | | | |||||| | ||||||| |||||||||||||||||||| ||||| || Sbjct 442 CGCGTCACGCCCTTGATGTTGGCGAACTCATCCTTGGCCGCCACCTCGCTCACCGGGATG 383 Query 1685 AGTTGGATCCCCTCCTTCTTCCCGTTCGGCGCGTAGACGAACAGGTTGCGGAAATTGCCA 1744 | || | || || ||||| ||||| |||| | ||||||||||| ||||| ||||| Sbjct 382 ATCTGCAGACCGTCTTTCTTGCCGTTGGGCGAATGCACGAACAGGTTCCGGAAGTTGCCC 323 Query 1745 GGCCCCTTCGCGGTCTTCAGCGCCGTGCGCAGCGCGTCGATGTCTTCCTCATTCTG--TG 1802 || || || | ||| |||||| |||||| || | ||| | |||| | || Sbjct 322 GGACCACGTGCCGCCTTGAGCGCCTCGCGCAGGCCGGTTACGTCGGACG-ATTCCGCCTG 264 Query 1803 CGGCGTCGGTCATGTAGAGGATGAAGCCGGCGTGGCTGCCGTTGTTGTAGTACTTACGCC 1862 || ||||||| ||||||||||||||||||||| |||||||||||||||||| |||| Sbjct 263 -GGAATCGGTCAGGTAGAGGATGAAGCCGGCGTGCGAGCCGTTGTTGTAGTACTTGCGCC 205 Query 1863 GGAACAGCGTGGCCGACTCGTTCAGCAGGGCGCTCTGTAGGGCGCAGAACCACTCCGGCA 1922 |||||||||||||||||||||| ||||| ||| ||| | ||| | |||||| |||| Sbjct 204 GGAACAGCGTGGCCGACTCGTTGAGCAGCGCGGCCTGCACGGCCGGCATCCACTCGGGCA 145 Query 1923 CTCCGTAGATTTCCTGATTGATGTCGGCCTCGCGCAGTTGGATCACGCTGCCC-TTCTCG 1981 ||||| | ||||| | |||| ||| ||||| ||| ||| |||||| | | Sbjct 144 GGCCGTACACCTCCTGGTCTGCATCGGACTCCCGCAGCTGGTACAC-CTGCCCGGCCGGG 86 Query 1982 AATTCGTGCT-CATCCTTCCAGCTGCGCACCTGGTAGAAC---GTCTCCAGATCGGTGCC 2037 ||||| |||| ||| | || || ||||||||| ||||| ||||| || ||| Sbjct 85 AATTCATGCTCCATGCGGCCCGC-GCGCACCTGAAAGAACTCGCCCTCCA---CGACGCC 30 Query 2038 GCGGCGCATGTACTTGGCCAGCGGC 2062 || |||| ||||| ||||||||| Sbjct 29 ACGCCGCACGTACTGCGCCAGCGGC 5 >seq2422 Length=594 Score = 230 bits (254), Expect = 5e-56 Identities = 214/272 (79%), Gaps = 0/272 (0%) Strand=Plus/Plus Query 2518 GGCTCGTTTTGCAATGCGTGGAATAGCGCCCAGGCCAGATCGGCGTGGCCGGTGTTGTCG 2577 || ||||| |||| || || | |||||||| |||||||||||||||||||| || Sbjct 322 GGTTCGTTCTGCAGGGCATGCAGCAGCGCCCACGCCAGATCGGCGTGGCCGGTCGTGCGC 381 Query 2578 TTGCGGCCGGCGGTATAGGTGAACTGGCGCCCACCGGCCGTGATGGTCTTGCGGATAGCC 2637 ||| || || || |||||| ||| || || | ||||||| ||||||| |||| || Sbjct 382 GAGCGCCCCGCCGTGTAGGTGGTCTGTCGGCCGCTGGCCGTGCTGGTCTTCTGGATGGCA 441 Query 2638 ATCAGCGCCTGGGCCAGGTCGGTCCAGCCGGCGTCGAATTCGAGGCGGCCGTTCTTGATC 2697 | ||||| ||||| || |||||||||||||||||| |||| || || |||||||||| Sbjct 442 AGCAGCGACTGGGTCATGTCGGTCCAGCCGGCGTCATATTCCAGACGCTCGTTCTTGATG 501 Query 2698 ACTGACCAGGCCTTCATGACCAACTGCGTCTTCACCTCGGGCGAGTAGCTGAAGGTGCGC 2757 || | ||||| | |||| | |||||||||||||||||||||||||||||||| | Sbjct 502 ACATCGAACGCCTTGAGCACCAGCCGCGTCTTCACCTCGGGCGAGTAGCTGAAGGTGGTC 561 Query 2758 ACCCCCGGGAAGAACTGGCGCACCAGCTGCGC 2789 | |||||||||||||||||| |||||||| || Sbjct 562 AACCCCGGGAAGAACTGGCGGACCAGCTGGGC 593 Score = 122 bits (134), Expect = 2e-23 Identities = 174/245 (71%), Gaps = 0/245 (0%) Strand=Plus/Plus Query 2133 AGTCCAGGGAGAACTGCTCGAACGTCGCCCGGCTGAGCAGGCGGTGCGGGATGAAGGTCT 2192 |||||| | | |||| |||| || || ||||| | || ||| |||| ||| || Sbjct 24 AGTCCAACGCCAGCTGCGCGAAGGTGGCGCGGCTCATGAGCTTGTGGGGGACGAACGTGC 83 Query 2193 TGGCCAGCATGTTGCGCTTGAACTTCAGGCCCGACTGCAGATAAACGCTCGACCCCACCG 2252 || ||||||||||||||||||| ||||||| |||||| || | | | | | Sbjct 84 TGACCAGCATGTTGCGCTTGAAGGTCAGGCCGCTCTGCAGGTAGGGGTTGGCGCGGGTGG 143 Query 2253 ACTTGGCCAGCCCCTCCATAGACAGCGGCGGCTCGTACCACCGCCCGTTCGGCCAGCACT 2312 | || ||||| || | | |||||||||||| | |||||||| ||||||| | Sbjct 144 TGCGCGACAACCCCTGCAGATTGACCGGCGGCTCGTAGTAGCGCCCGTTGCGCCAGCATT 203 Query 2313 CGAGATAGTCGAGGATGCCCCGGCCGTCGAGCACCGGCATCGGATCACCGAAGGTGAAGG 2372 |||| |||||||||||||| || || ||||||||| |||| || ||||| ||||| | Sbjct 204 CGAGGTAGTCGAGGATGCCGCGCGATTCCAGCACCGGCGTCGGCTCCCCGAACGTGAACG 263 Query 2373 CCTCG 2377 | ||| Sbjct 264 CTTCG 268 >seq1269 Length=1066 Score = 226 bits (250), Expect = 6e-55 Identities = 245/325 (75%), Gaps = 8/325 (2%) Strand=Plus/Plus Query 3870 CTTGGGACCTTCGTTACGCTTGGCAAGCTCGGGGTTCAGGTCGGTTTCCGTACCACCGCC 3929 ||| || || |||| || ||||| | | | ||||||||||| | || | || ||||| Sbjct 4 CTTCGGGCCAGCGTTGCGGTTGGCGACCGCTGGGTTCAGGTCCGCCTCGTTGCCGCCGCC 63 Query 3930 CTGGTAGCGCTGGATCCGCGCCTGGCGCTCAAGCTGCCGATGCAGCAGGTCGATTTCCTT 3989 |||||| |||||||| || ||||| ||||| ||||||||||||||||||||||| || || Sbjct 64 CTGGTAACGCTGGATGCGGGCCTGCCGCTCCAGCTGCCGATGCAGCAGGTCGATCTCTTT 123 Query 3990 GTAGTCACCGCCGGTCTTGCCGTCCTTCAGGATCAACTGAACCAACCGGGCTTCCAGGGC 4049 | |||| ||||||||||| || ||||| |||||| ||||||| || |||| ||| Sbjct 124 GAAGTCGCCGCCGGTCTTACCTTCCTTGTGGATCAGGATGGCCAACCGCGCCTCCAAGGC 183 Query 4050 GCCCCCGATCCGTTCTACGCTGTCGGCCCGGTCCCATCCGTCGCGGTCCTTCCATGAGTG 4109 ||| || | || || ||| | ||||| ||||||||| ||||||| ||||||| ||| Sbjct 184 GCCGCCAACACGCTCCACGGTATCGGCGCGGTCCCATTCGTCGCGCGCCTTCCAGCTGTG 243 Query 4110 AAGGGTCTTGTCCTTCTCGCCCAGGTGGTCGGCGATGTCGCAGACACGCCAGCCCATCCA 4169 | ||||| || || || ||| ||| ||||||| |||||||||||||| Sbjct 244 GACGGTCT-----TTNNCGATCA---ACTCGCAGATATCGCAGATGCGCCAGCCCATCCA 295 Query 4170 GTACAGGAATTTGGCCTGGCGGCGG 4194 ||||| || || |||||||| ||| Sbjct 296 GTACAAAAACTTTGCCTGGCGACGG 320 Score = 167 bits (184), Expect = 5e-37 Identities = 282/408 (69%), Gaps = 3/408 (1%) Strand=Plus/Plus Query 4409 TTCCGCATCGCCGTCGAAGGGGCGACCACGGACGGCCGCAACATCGAGCGCGACTGGATC 4468 ||||| | || |||||||| || ||||| || |||||| ||||||||| | |||| Sbjct 547 TTCCGTGTGGCTGTCGAAGGCGCCACCACCGATGGCCGCGTGATCGAGCGCCAGCAGATC 606 Query 4469 GAGCAGATGGCCGCGCAGTACGACCCGAACACCTACGGCGCGCGGATCAACTGCGAGCAC 4528 | | | ||||| | ||||||||| | ||||||||| |||||| |||||| Sbjct 607 GTGGAAATGGCTGAAACCTACGACCCGGAGGTCTACGGCGCCCGGATCTGGATGGAGCAC 666 Query 4529 ATCAAGTGGGCCTGGCCGGCTGGTGAGTTCGGCGCCTATGGCGACGTGCTGGCGTGCAAG 4588 | | || ||||| | |||| ||||||| ||||||||| | ||| |||| Sbjct 667 TACCGCAGCGCGCTGCCGGACAGCCCGTTCCGCGCCTACGGCGACGTGGTCGCGGTCAAG 726 Query 4589 GCGGAAGAGATCGACATCAACGGGCAGAAGAAGCTGGCCCTCTTCGCCCAACTGGAGCCC 4648 || ||||| |||| ||| ||| |||||||| |||| || |||||||| | || || Sbjct 727 GCCGAAGAAGTCGAAATCGCCGGCAAGAAGAAGATGGCGCTGTTCGCCCAGGTCGACCCG 786 Query 4649 AACCAGGCGCTGCTGGAACTGAACAAGCAGCG---GCAGAAGGTCTACACCTCGGTCGAG 4705 | | | ||| | || || ||| ||| ||||||||||| |||| ||||| Sbjct 787 ACCGCTGACCTGGTCGACATGGTCAACGTGCGCAAGCAGAAGGTCTTCACCAGCATCGAG 846 Query 4706 ATCGATCCCAAGTTCGCCGACACCGGCAAGGCCTACTTGGTCGGCCTGGCCATCACCGAC 4765 || | || | || ||||||| ||||||||||||| || |||||||| | | || || Sbjct 847 ATTGCCCCGGAATTTGCCGACAGCGGCAAGGCCTACCTGTACGGCCTGGGCGTGACGGAT 906 Query 4766 TCCCCCGCCAGCCTGGGTACCGAGGCGCTCTCCTTCAGCGCCAAGAAC 4813 || || |||||| | || ||| | ||| ||||| ||||||||| Sbjct 907 TCGCCGGCCAGCATCGGAACCAACATGCTGGCCTTCTCGGCCAAGAAC 954 >seq3006 Length=629 Score = 197 bits (218), Expect = 3e-46 Identities = 232/309 (75%), Gaps = 6/309 (2%) Strand=Plus/Plus Query 17602 GATCGATCAGGAGGTCGGTTGGCACAAGACCCTGTCGAACGTCGCCGTCAACGGCGTGAC 17661 ||||||| || || || ||||| ||| | ||||| ||||| ||||| ||||||||| Sbjct 5 GATCGATGAGCAGCAAGGCTGGCATAAGTCGCTGTCCAACGTGGCCGTAGCCGGCGTGAC 64 Query 17662 CGGCATCAGCGCCGACGTGTTCTGGGACCTGCAGAGCCCCAGC-ACCGACGCCAACTACC 17720 |||||||||| ||||| |||||||||||| | || || ||||||||| | | Sbjct 65 CGGCATCAGCCGGGACGTCCATTGGGACCTGCAG-GATCCGGCGACCGACGCCGGCATGC 123 Query 17721 TCAACGAGAACGAGGTCACCACCCTGGTGCAGG--AAGGGGGATTCCGTTTCTGGGGTTC 17778 |||| | ||| ||||||| ||| | | || ||| | | |||||||| || Sbjct 124 TCAATGCCGCCGATATCACCACGCTGATCAACTCCAACGGGTA--CAAGTTCTGGGGATC 181 Query 17779 GCGCACCTGCAGCGATGATCCGCTGTTCGCCTTCGAGAACTACACCCGCACCGCCCAGGT 17838 |||||||||||||||||| |||||||| |||||||||| || ||||||||| || ||| | Sbjct 182 GCGCACCTGCAGCGATGAGCCGCTGTTTGCCTTCGAGACCTCCACCCGCACGGCGCAGAT 241 Query 17839 GCTGGCCGACACTATCGCCGAAGCGCACATGTGGGCGGTTGACAAGCCCATGCACCCGTC 17898 ||||||||||| |||||||| ||||| || || |||||||| ||||||| || Sbjct 242 CCTGGCCGACACCATCGCCGAGGCGCAGTTGGTCTACGTCGACAAGCCGCTGCACCCCTC 301 Query 17899 ACTGGTGCG 17907 |||||||| Sbjct 302 GCTGGTGCG 310 Score = 84.2 bits (92), Expect = 5e-12 Identities = 87/112 (78%), Gaps = 4/112 (4%) Strand=Plus/Plus Query 18034 CATCACCTACGACTACACCCCGGTGCCGCCGCTCGAGGACCTGACCTTCT--TCCAGAAG 18091 |||| || |||||||||||||||||||||||| || ||||| || || |||| Sbjct 433 CATCGACTTCGACTACACCCCGGTGCCGCCGCTGGAAAACCTG--CTGCTGAACCAGCGC 490 Query 18092 ATCACCGACAGCTATCTCGTCGACTTCGCCAGCCGCGTCAACGCCTGACGCC 18143 ||||||||| ||||| ||| ||| ||| | | |||| ||| || |||||||| Sbjct 491 ATCACCGACCGCTATTTCGCCGATTTCCCGACCCGCATCAGCGGCTGACGCC 542 >seq7430 Length=439 Score = 129 bits (142), Expect = 1e-25 Identities = 225/322 (70%), Gaps = 8/322 (2%) Strand=Plus/Minus Query 29287 CGGTGCGATCTTCACCGGCAGCGGCGCGCAGCTTGACCAGATCATGAAGCTGCAGCTCAC 29346 ||| || |||||| ||||||| | ||||||| |||||||||||| ||||||| Sbjct 327 CGGCGCCATCTTCGATGGCAGCGCCTCGCAGCTGCTGCAGATCATGAAGGTGCAGCTGGA 268 Query 29347 CGGCTTGAAGACGGTGGCCACCATCGATTACCTGGGCTACA-GCCGGGAG-CATGCCTGC 29404 || | | || || |||| | |||| | | || |||| ||||| | || | | Sbjct 267 CGACATCAAAGAAGTTCACACCGTGGATTTCGTCGGGTACACGCCGGAACACAAGACA-- 210 Query 29405 TACGTTCTGGGCGACGTGGCGGTGCGCGGCGGCGTGATCGAGAAGGCCAACGCCGAAGAC 29464 ||| | | || ||| | |||||||||| |||| |||| ||||||||||| ||| Sbjct 209 TACATCTTCGGTGACCTCGCGGTGCGCGATGGCGAGATCAGCCTCGCCAACGCCGAGGAC 150 Query 29465 TTCTTCGAGTTCCAGAAGCTGCGCCTGAAGACCCTGCAGCGCTCGATCAAGCTGCAGATC 29524 | ||||||||| |||| |||||| | ||||| ||| || |||||| || || Sbjct 149 TATTTCGAGTTCAAGAAACTGCGCATCAAGACGACGCAACGGTCGATCCGCATG--GACG 92 Query 29525 GCCACCGACGCCAAGGAC--TACCGCCCCGAGTGGCTGGACTGGCTGTGGACCTGCTTCG 29582 || || ||| | || ||||| |||| ||| || | ||||||||||| ||||||| Sbjct 91 TGCAGCGGGACCACGAACAGTACCGGACCGACTGGTTGCAATGGCTGTGGACGTGCTTCG 32 Query 29583 GCGCCAAGGGCCTGGTGGCGCT 29604 || | || ||| |||||||||| Sbjct 31 GCACGAACGGCATGGTGGCGCT 10 >seq7034 Length=996 Score = 120 bits (132), Expect = 7e-23 Identities = 317/475 (67%), Gaps = 16/475 (3%) Strand=Plus/Minus Query 22631 GGCTGGAGTGACAGCGGACTGGTCGACAAGGGCACCTACACCGTCGACGAAACCGAGCAC 22690 || ||| | || ||||| ||| |||| |||||||| | ||| ||||| |||||| Sbjct 714 GGGTGGCGCGAAAGCGGCCTGTTCGAGAAGGGCACGTTTGTCGTTGACGACGTGGAGCAC 655 Query 22691 AGCGGCGCGCCGGACGTGCTCAGCATCCGCGCCCGCTCAGCGGACCTGCGCAAGGGCCT- 22749 ||||||||||| ||| | |||| ||||| || ||||| || ||||| | | | ||| Sbjct 654 AGCGGCGCGCCTGACATTCTCACGATCCGTGCGCGCTCTGCCGACCT-CACCGGTGCCGT 596 Query 22750 --GAAGGTCAAGCGCGAACGCAGTTGGAGCAGCCCGAAGACGCTGGGCGACGTGCTCACC 22807 | || | |||||||||||| ||| | | | | | ||||||||| | ||| Sbjct 595 CCGCAG--CCGGCGCGAACGCAGCTGGCACGACACCA---CCCTGGGCGACATTCTCGGT 541 Query 22808 GACATCGCCCTCG-GCAACAACCTGAAGCCGGTGCTCGCGCCGGCGCTGGCGGGCCTGCC 22866 | |||||| || ||| || || || | |||| ||| ||||| || | | Sbjct 540 GCCATCGCGGGCGAGCATTCAC-TGCGCCCAGCCATCGCCGCGGATCTGGCCAGCATCGC 482 Query 22867 GATCCTGCAGCTGGACCAGGCCAACGAGTCCGACGCCAACCTGCTGACACGCCTGGG-CG 22925 ||| || || |||||||||||||| ||| ||||||||| || || ||||| || Sbjct 481 AGTCCCCCACCTCGACCAGGCCAACGAAAGCGATATCAACCTGCTCACCCGGCTGGGGCG 422 Query 22926 AGGACTTCGATGCGGTGGCCACCGTGAAAGCCGGCTGCCTGCTCTGCCTGCCGGCCGGTG 22985 | |||||| || | || || || ||||| ||| ||| ||| | | | Sbjct 421 TCG-CTTCGANNAGG---CAACGGTCAAGGCCGGGGCGCTGATCTTTGCGCCCATCTGCG 366 Query 22986 GCGGCAAGACTGCCAGCGGCCTGGCGCTGCCGCACATCAACCTCACCCGCCAGGATGGCG 23045 ||||| ||| |||||||||| | ||||||| | | | |||| || | |||| Sbjct 365 CCGGCACGACCGCCAGCGGCCAGCCGCTGCCCGGCGTGCAAATCACGCGTGCGTCGGGCG 306 Query 23046 ACCAGCACCGCTACCTGCAGGCCGACCGCGACAGCTACGACGGCGTGCGCGCGTA 23100 | |||||||||||| ||||||||||| | ||| ||| |||||||| || Sbjct 305 ATCAGCACCGCTACAGCGTTGCCGACCGCGAGAAATACACCGGTGTGCGCGCCTA 251 >seq6269 Length=575 Score = 118 bits (130), Expect = 2e-22 Identities = 160/225 (71%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 5289 CGCCAAGCTCAACGGCGTGAACTCCGCCGTCCAGACCTTCGCCGTCGAGCCGAGTGTCCA 5348 |||| |||| |||||||| | ||||| | | |||||||||||||| || | ||||| Sbjct 226 CGCCCAGCTGAACGGCGTCACTAGCGCCGCCAACACCTTCGCCGTCGAACCCGGCGTCCA 167 Query 5349 GCAGAAGCTGGAGCAACGTATTCAGGAGTCCAGCGAGTTCCTGAAGCAGATCAACGTCTA 5408 ||||| | |||| || || || ||| ||||| ||||||| | |||||| | Sbjct 166 GCAGACGATGGAAGCCCGCATCCAAGAGAGCAGCGCTTTCCTGACGTCCATCAACATGCC 107 Query 5409 CGGCGTCGACGAGCTGCAGGGCGAGAAGATCGGCATCGGCGTCNNNNNNACCATCGCCAG 5468 ||| || ||| || ||||||||||||||||| | |||||| |||||||| | Sbjct 106 CGGTGTGATCGACCTCAAGGGCGAGAAGATCGGCGTGGGCGTCAACGGCACCATCGCTGG 47 Query 5469 CCGTACCGATACCACTGGCGACGGTGTACGCAAGCCGCGCGACGT 5513 || ||||| |||| ||| ||| | |||| ||||| ||| || Sbjct 46 TCGCACCGACACCAGCGGCAACGCCGAACGCCAGCCGGCCGATGT 2 >seq4829 Length=914 Score = 98.7 bits (108), Expect = 2e-16 Identities = 235/345 (68%), Gaps = 18/345 (5%) Strand=Plus/Minus Query 28354 CGCGACAGTACGCTTCCCGCTGAAGAAAGGCGGCTACTGGGAACGCCTAATCGATCGCCC 28413 ||| || || || |||| |||| || || |||| ||||| ||||| ||||| | || Sbjct 390 CGCTACGGTTCGGTTCCAGCTGGCCAAGGGTGGCTGGTGGGAGCGCCTGATCGACAGGCC 331 Query 28414 GAGCCGCTTCGGCAAGAAGAAGGCCCGCTTCAAGCCGGGCGACAGCCCGCGC-GGCGTCT 28472 | ||| || ||||||| |||||| || || |||||| | ||| ||| || || | Sbjct 330 GCACCGGTTTGGCAAGATGAAGGCACGGTTTGCGCCGGGGCAAAGCTA-CGCAGGTGTGT 272 Query 28473 GGTGGTGCCCACCCAGCGTCGACCTGCAGGAGGTG---AAGGAGC------TGTGGATCG 28523 ||||| | ||| || || || || ||||| | | || | ||||||| Sbjct 271 GGTGGGCGGCTCCC-GCTGCG--CTTGAGCAGGTGCGCACCGCGCGAGAAGTCTGGATCG 215 Query 28524 TCGAAGGTATCTTCGACGCCATCGCGCTGCTGCACCACGGCATCGACGCCGTGTCGGCCA 28583 | || || ||||| ||||||||||| || ||||| | ||||||| |||||| | |||| Sbjct 214 TGGAGGGCATCTTTGACGCCATCGCCCTCCTGCAGCGCGGCATCTGCGCCGTCGCCGCCA 155 Query 28584 TGAGTTCCAACGCCT-TCCCCGAGCAGTCTTTGCGCGAACT-CGCGACAGCCCGTGGCGG 28641 || |||||||| |||| |||| || | ||||| |||||| || | || Sbjct 154 TGTCCAGCAACGCCTATCCCGAAGCA-TCGCTCAAGGAACTGCGCGAC-CTTCGCGCCGC 97 Query 28642 CAAGCTGCCGAAACTGATCTGGGCGCTGGACAACGAACCCGGCGC 28686 | | || || | |||| | |||| ||||||||||||| |||| Sbjct 96 CGACCTTCCCACACTGGTATGGGGATTGGACAACGAACCGAGCGC 52 >seq5091 Length=1229 Score = 93.3 bits (102), Expect = 1e-14 Identities = 105/141 (74%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 12373 GCACACATCCGCCAGTCGATCGCCGACATCCTCACAACTCGCATCGGTACCCGCGTCATG 12432 || ||| | |||||||| ||||||||||||||||| || | |||||| | || || | Sbjct 141 GCGCACCTTCGCCAGTCCATCGCCGACATCCTCACCACCCCCATCGGCTCGCGTATCGAG 82 Query 12433 CGACGCGAATACGGCAGCCAGTTGCCGGAGCTGATCGATGCTCCGTTCAACGACACCACC 12492 || || |||||||| | | |||||||||||||||| || |||||||| | ||| Sbjct 81 CGCCGTGAATACGGTTCGCTGCTGCCGGAGCTGATCGACCAGCCCTTCAACGATGCGACC 22 Query 12493 CGCCTGCAGGTCTATGCCGCC 12513 || ||| || | | || |||| Sbjct 21 CGACTGAAGCTGTTTGGCGCC 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 113716326324328