Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20deminutivum_20[genbank_20GCA_5F900092275.1_202017- 01-02] 13,382 sequences; 45,801,537 total letters Query= NC_003324.1 Length=57416 Score E Sequences producing significant alignments: (Bits) Value seq702 96.9 1e-15 >seq702 Length=79980 Score = 96.9 bits (106), Expect = 1e-15 Identities = 144/202 (71%), Gaps = 2/202 (1%) Strand=Plus/Minus Query 44066 GATCATGCCGAGCGCTGCGAGGTAGGTGTCGAGGATGGCCTCTTGCTCCATCCGCTCGTC 44125 || ||||||||| || | ||| |||||||| || || | ||| | ||||||| Sbjct 9943 GACCATGCCGAGGGCGTTCATGTACAGCTCGAGGATCGCTTCCTCTTCCTTGCGCTCGTT 9884 Query 44126 GGTGTCCTGCTTGCGCAGCGAGATCACCTTCCGCAGGATCTTGGCATCGAAGCCGGTCCC 44185 | |||| ||||||||| || | | | || | |||||||| ||| ||||| || Sbjct 9883 CGCATCCTTCTTGCGCAGGCGGACGATCGTGCGGATGATCTTGGTGTCGTAGCCGCGGCC 9824 Query 44186 CTTTGCCTC-GCCGTACACATCCTTGATGTCGTCGGCGATGGTCTTCTTTTCTTCCTCCA 44244 ||| || || ||| | ||| |||||||||||||| | || ||||||||||||| | Sbjct 9823 CTTGGCTTCCGCCAT-CACTTCCTTGATGTCGTCCTGAAGCGTGGTCTTTTCTTCCTCAA 9765 Query 44245 AGCGTTCGATGCGGTGGATGAA 44266 ||| |||||||| | |||||| Sbjct 9764 GGCGCTCGATGCGCTCGATGAA 9743 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 183580422368952