Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20deminutivum_20[genbank_20GCA_5F900092275.1_202017- 01-02] 13,382 sequences; 45,801,537 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq5294 105 6e-18 seq1087 100 2e-16 >seq5294 Length=478 Score = 105 bits (116), Expect = 6e-18 Identities = 138/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 20931 TCAACGTGGTTGTTGTAAACGTGGGCGTCACCCAAGGTGTGCACAAAGTCTCCCGGGGTC 20990 |||||||||||| ||| | || ||||| |||| ||| ||||| ||||| ||| | | Sbjct 415 TCAACGTGGTTGGAGTACAGATGCGCGTCGCCCAGGGTATGCACGAAGTCGCCCACGCCC 356 Query 20991 AGGCCCGTGACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAACGGG 21050 || || ||| | || || | || | || || || ||||||||||||||||| ||||| Sbjct 355 AGCCCGGTGGCCTGCGCCACCATGTGGGTGAGCAGTGCGTAGCTGGCGATGTTGAACGGC 296 Query 21051 ACCCCGAGGCCCATGTCGGCGGACCTCTGGTACAGCTGGCAGGACAGCTCCCCCCGAGCC 21110 || || ||| |||||| || | |||||||| ||||||| |||| || || Sbjct 295 ACGCCCAGGAAGATGTCGCCGCTGCGCTGGTACAACTGGCAGCTGAGCTTGCCGTCCACC 236 Query 21111 ACGTAAAACTG 21121 ||||| ||||| Sbjct 235 ACGTAGAACTG 225 >seq1087 Length=202632 Score = 100 bits (110), Expect = 2e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 20952 TGGGCGTCACCCAAGGTGTGCACAAAGTCTCCCGGGGTCAGGCCCGTGACGTGAGCGATC 21011 || || || |||| ||||| || || || ||||| ||| |||||||| || || | | Sbjct 83338 TGCGCATCGCCCAGCGTGTGAACGAAATCACCCGGCTGCAGACCCGTGACCTGCGCCACC 83397 Query 21012 AGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAACGGGACCCCGAGGCCCATGTCGGCG 21071 | ||||| ||||| ||| ||||| || ||||| || ||||| || |||||| Sbjct 83398 ATGAGGGTCAGCAGGGCATAGGATGCGATATTGAACGGCACGCCGAGAAAGATATCGGCG 83457 Query 21072 GACCTCTGGTACAGCTGGCAGGACAGCTCCCCCCGAGCCACGTAAAACTGACACAAAACG 21131 || | |||||| ||||||||||| |||| || |||||||| ||||| ||| | Sbjct 83458 GAGCGCTGGTAGAGCTGGCAGGAAAGCTTTCCGTCGGCCACGTAGAACTGGAACAGGCAG 83517 Query 21132 TGACAAGGAGGGAGAGCCATCCGCGCGAGGTCCGCGGGGTTCCACGCG 21179 || || || || || ||||| ||| | ||| || ||||| ||| Sbjct 83518 TGGCAGGGCGGCAGCGCCATTTCATCGACGAGCGCCGGATTCCATGCG 83565 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427706232675360