Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20deminutivum_20[genbank_20GCA_5F900092275.1_202017- 01-02] 13,382 sequences; 45,801,537 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq2491 131 2e-25 >seq2491 Length=10632 Score = 131 bits (144), Expect = 2e-25 Identities = 309/458 (67%), Gaps = 8/458 (2%) Strand=Plus/Plus Query 50406 TTTGGCCGAACGTTTAGTGGCGTTTGCCATAGTTGAAGGTGTGtttttttCCGGTAGCTT 50465 ||| ||||||||||| ||||| || ||| ||| ||||| | || || ||| ||||| Sbjct 4411 TTTTGCCGAACGTTTGGTGGCTTTCGCCGCAGTGGAAGGCATTTTCTTCAGCGGGAGCTT 4470 Query 50466 TGCAGCCATATTTTACATTAAAACCTTAGGCATAATGCCCGGCCTCACGTTTAGCAACGA 50525 | || || | | |||| |||| | ||||| || || || ||||| || || Sbjct 4471 CTGTTCGATCTTCTGGTTGAAAAAAAGAGGCCTGATGCCAGGGCTAACCTTTAGTAATGA 4530 Query 50526 GTTGATTTCGCGCGACGAAGGAATGCACACAGACTTTGCGTGTTTGTACTACAATACGCG 50585 ||||||||| | || || || ||||| || ||||| || || || || | || Sbjct 4531 GTTGATTTCCAGAGATGAGGGGATGCATTGTGAATTTGCCTGCCTGCTTTATAAAATGCT 4590 Query 50586 CGTAAATGAAAAATTATCATACGAAACAATTT-TGGACATGTTCAAAGAAGCCGTCGACA 50644 | |||| ||| | | | | ||| || |||| || || || || || || | Sbjct 4591 CAAAAAT--AAACTGAGCC-AGGAAGTCGTTCATGGA-ATTATCCGCGACGCGGTAGAAA 4646 Query 50645 TCGAAAAAGAGTTTTTCACGGACGCTTTACCCGTGGCATTGTTGGGCATGAACGCAGACA 50704 ||||||| || ||| | || || || || || || || || | || ||||| ||| | Sbjct 4647 TCGAAAAGGAATTTATTACAGATGCCTTGCCGGTTGCCCTGATCGGGATGAATGCAAAAC 4706 Query 50705 TGATGTGCGAGTACATTGAGTTTGTTGCAGACAGATTGTTGTTGCAGCTGGGACA-ACCG 50763 |||||| |||| |||||||||||||||||||||| | || | | ||||| | ||| Sbjct 4707 TGATGTCACAGTATATTGAGTTTGTTGCAGACAGATGGCTGCAGGAACTGGGTTATACCA 4766 Query 50764 AAATACTATAATGCACGTAACCCCTTTCCGTTTATGAATAACATATCGTTGGAGGGCAAA 50823 ||||| ||| |||| || || ||| |||||| | | || || || | |||||| Sbjct 4767 AAATA-TATCATGCCACCAATCCGTTTGATTTTATGGAGATGATCTCCCTGCAAGGCAAA 4825 Query 50824 ACAAACTTTTTCGAAAGACGTGTAGGCGAATA-CAAAA 50860 || || || || || | |||||| || || || ||||| Sbjct 4826 ACCAATTTCTTTGAGAAACGTGTGGGTGATTATCAAAA 4863 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 506929589166240