Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20deminutivum_20[genbank_20GCA_5F900092275.1_202017- 01-02] 13,382 sequences; 45,801,537 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq32 122 1e-22 seq915 109 8e-19 >seq32 Length=13759 Score = 122 bits (134), Expect = 1e-22 Identities = 209/292 (72%), Gaps = 16/292 (5%) Strand=Plus/Minus Query 97977 ATCATGTACAACAATGGGTCCATTCAAAACATTACCAT-CATCCCGGAAGAGTTGC-GCA 98034 ||||| |||| ||| ||||| || ||| | |||| |||||| || || ||| | | Sbjct 3033 ATCATCGCCAACCGTGGTTCCATCCAGAACGT-ACCAGGCATCCCCGAGGACTTGAAGGA 2975 Query 98035 GAATCTACAAGACTGTCTGGGAGATTCCGACCAAGACG-CTGATCGATATGGCTGCCGAC 98093 | | |||||||||||||||||||| ||| | | | | || || || ||||||||||| Sbjct 2974 GT-TGTACAAGACTGTCTGGGAGAT-CCGTCAACGTAGTCTCATTGACATGGCTGCCGAT 2917 Query 98094 AGAGGTGTCTACATTGACCAGAGTCAATCGTTCAA--TCTGTACGTTGCCGAGCCCACCT 98151 | |||| || ||| || || || || ||||| ||| || |||||||||||| || Sbjct 2916 CGTGGTGCCTTCATCGATCAATCACAGTCATTCAACGTCTTTA--TTGCCGAGCCCAACT 2859 Query 98152 A---CAGTCGTATGACTTCGATACACTTTTACGCATGGAACAAGGGCCTCAAGACGGGCA 98208 || | | || || || ||||| ||||||||||| ||||| || ||||| |||| Sbjct 2858 TTGCCAAGC---TCACCTCAATGCACTTCTACGCATGGAAGAAGGGTCTTAAGACTGGCA 2802 Query 98209 TGTACTATCTGAGAACAAAGTCGGCCACCAATGCCATACCATTTACGGTGGA 98260 |||||||| ||||||| | || || ||||||| | ||| || || || Sbjct 2801 TGTACTATTTGAGAACTCGTGCCGCTGCCGATGCCATCCAATTCACTGTCGA 2750 >seq915 Length=13476 Score = 109 bits (120), Expect = 8e-19 Identities = 114/147 (78%), Gaps = 2/147 (1%) Strand=Plus/Plus Query 125428 TGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTT-TGCGGCCATCTTT 125486 |||| || || || || |||||||| ||||| || ||||| || ||| |||||||| Sbjct 139 TGGTCGCCTTTGCAGCTGTAGAGGGTATCTTTTTCAGTGGTAGCTTCTGCT-CCATCTTT 197 Query 125487 TGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGA 125546 |||||||||||||| || | ||||||||| |||| | ||||||| | || ||| Sbjct 198 TGGCTCAAGAAGCGTGGCTTGATGCCCGGATTGACATTCTCTAACGAGCTCATCAGTCGT 257 Query 125547 GACGAGGGCCTACACTGTGACTTTGCC 125573 |||||||| || ||||||||||||||| Sbjct 258 GACGAGGGTCTTCACTGTGACTTTGCC 284 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 740935239322320