Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20deminutivum_20[genbank_20GCA_5F900092275.1_202017- 01-02] 13,382 sequences; 45,801,537 total letters Query= NC_005261.2 Length=137821 Score E Sequences producing significant alignments: (Bits) Value seq10128 131 1e-25 >seq10128 Length=369 Score = 131 bits (144), Expect = 1e-25 Identities = 166/226 (73%), Gaps = 3/226 (1%) Strand=Plus/Plus Query 99546 CACGGTGAGCGAGGTGTTGAGCAGCAGCACGCCGCGGCGCGCCCAGGCCTCCAGGCAGCC 99605 |||||| ||| | ||||||||||||||||| |||||||||| | | ||||||||| Sbjct 17 CACGGTCAGCACCGCATTGAGCAGCAGCACGCCCTGGCGCGCCCACGGCAGCAGGCAGCC 76 Query 99606 GTGCTGCGGCCGCGGGGTCCCGGGGAAGTTCTTCTGCACGGCCGCGTAGATGTTCTGGAG 99665 ||| | ||| ||||| |||| || | |||| | || ||||||||| | || Sbjct 77 GTGGTCCGGGCGCGGAATCCCCAGGTCGG-CTTCG--ATTTCCTTGTAGATGTTGAGCAG 133 Query 99666 GCTGGGCGGGATCGGAACGCCGCGGTTCACGCTGAAGGCCAGGCCGTGGGCCTGCCCGTG 99725 ||||| | ||| |||||| | |||| ||| |||||| |||||||| || Sbjct 134 CGACGGCGGCACCGGGACGCCGGGCATCACCGAGAAACTCAGGCCATGGGCCTGGCCCGC 193 Query 99726 GCTGTGGTAGGGGTCCTGGCCCAGGATGACGACCTTGACGTCCTCG 99771 || |||||||||||||||||||||||| || |||||||| | |||| Sbjct 194 GCCGTGGTAGGGGTCCTGGCCCAGGATCACCACCTTGACCTGCTCG 239 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 440825448586320