Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20deminutivum_20[genbank_20GCA_5F900092275.1_202017- 01-02] 13,382 sequences; 45,801,537 total letters Query= NC_005856.1 Length=94800 Score E Sequences producing significant alignments: (Bits) Value seq8001 241 8e-59 seq1888 230 1e-55 seq3214 190 1e-43 seq3889 147 1e-30 seq6976 136 2e-27 seq11800 109 3e-19 seq10729 104 1e-17 seq10525 98.7 6e-16 seq6167 96.9 2e-15 seq12818 95.1 7e-15 seq8153 86.0 4e-12 >seq8001 Length=883 Score = 241 bits (266), Expect = 8e-59 Identities = 136/138 (99%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 7649 TAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTT 7708 || |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 746 TAAGGAAGGTGCGAATAAGCGGGAAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTT 805 Query 7709 CATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTC 7768 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 806 CATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTC 865 Query 7769 TTCGCCATTTAAGGCGTT 7786 |||||||||||||||||| Sbjct 866 TTCGCCATTTAAGGCGTT 883 >seq1888 Length=917 Score = 230 bits (254), Expect = 1e-55 Identities = 148/162 (91%), Gaps = 0/162 (0%) Strand=Plus/Plus Query 22624 TGGGTAATGACTCAAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTG 22683 ||||||||||||| |||||| ||||||||||||||||||||||||||||||||||| ||| Sbjct 746 TGGGTAATGACTCCAACTTACTGATAGTGTTTTATGTTCAGATAATGCCCGATGACCTTG 805 Query 22684 TCATGCAGCTCCACCGATTTTGAGAACGACAGCGACTTCCGTCCCAGCCGTGCCAGGTGC 22743 |||||||||||||||||||||||||||||||| ||||||||||||||| |||||| || Sbjct 806 TCATGCAGCTCCACCGATTTTGAGAACGACAGTAACTTCCGTCCCAGCCTTGCCAGATGT 865 Query 22744 TGCCTCAGATTCAGGTTATGCCGCTCAATTCGCTGCGTATAT 22785 || ||||||||||| ||||| |||||||| ||||| || ||| Sbjct 866 TGTCTCAGATTCAGATTATGTCGCTCAATGCGCTGAGTGTAT 907 >seq3214 Length=938 Score = 190 bits (210), Expect = 1e-43 Identities = 108/110 (98%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 8740 GCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCT 8799 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 1 GCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCCATGGCT 60 Query 8800 CCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTA 8849 ||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 61 CCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTA 110 >seq3889 Length=2902 Score = 147 bits (162), Expect = 1e-30 Identities = 83/84 (99%), Gaps = 0/84 (0%) Strand=Plus/Minus Query 23313 GGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAAT 23372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2863 GGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAAT 2804 Query 23373 CAGTAAGTTGGCAGCATCACCTGC 23396 ||||||||||||||||||||| || Sbjct 2803 CAGTAAGTTGGCAGCATCACCGGC 2780 >seq6976 Length=581 Score = 136 bits (150), Expect = 2e-27 Identities = 77/78 (99%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 22625 GGGTAATGACTCAAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGT 22684 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 504 GGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGT 563 Query 22685 CATGCAGCTCCACCGATT 22702 |||||||||||||||||| Sbjct 564 CATGCAGCTCCACCGATT 581 >seq11800 Length=371 Score = 109 bits (120), Expect = 3e-19 Identities = 180/257 (70%), Gaps = 2/257 (1%) Strand=Plus/Minus Query 72250 TGAGCATGATTATGATCGACTACCTGCAACTTATGCGCGTCCCCGAGCTGCAA-GATAAC 72308 || || |||| |||||||||||||||| | ||| | || || | || || || ||| Sbjct 276 TGGGCCTGATCGTGATCGACTACCTGCAGTTGATGAGTGTGCCGG-GCAACAGCGAAAAC 218 Query 72309 CGAACGCTGGAAATTGCCGAGATTTCTCGCTCACTGAAGGCGTTGGCGAAGGAATTACAA 72368 || || ||||| | || || || || || |||||| |||| |||||| | | Sbjct 217 CGCGCGACCGAAATCTCGGAAATCTCGCGTTCGTTGAAGGGCCTGGCCAAGGAACTCAAC 158 Query 72369 GTACCGGTGGTGGCATTGTCACAACTTAATCGATCGCTTGAACAGCGTGCGGACAAACGA 72428 || |||||| | || |||| || || || || ||||| ||| |||| | ||||| || Sbjct 157 GTGCCGGTGATCGCGCTGTCCCAGCTCAACCGCTCGCTGGAAACGCGTACCGACAAGCGC 98 Query 72429 CCGGTAAATTCAGATTTACGTGAATCAGGAGCAATTGAGCAGGACGCAGACCTGATTATG 72488 ||||| | | || | || ||||| || || || ||||||||||| ||| |||| || Sbjct 97 CCGGTGATGGCCGACCTTCGCGAATCCGGCGCTATCGAGCAGGACGCGGACATGATCGTG 38 Query 72489 TTTCTGTATCGCGACGA 72505 || | || |||||||| Sbjct 37 TTCATCTACCGCGACGA 21 >seq10729 Length=418 Score = 104 bits (114), Expect = 1e-17 Identities = 226/336 (67%), Gaps = 3/336 (1%) Strand=Plus/Minus Query 72251 GAGCATGATTATGATCGACTACCTGCAACTTATGCGCGTCCCCGAGCTGCAAGATAACCG 72310 |||| |||| ||||||| |||||||| || |||||| ||| || | || || ||| | Sbjct 382 GAGCTTGATCCTGATCGATTACCTGCAGCTCATGCGCTGCCC--AGGT-CAGGAAAACAG 326 Query 72311 AACGCTGGAAATTGCCGAGATTTCTCGCTCACTGAAGGCGTTGGCGAAGGAATTACAAGT 72370 | || || || || || | || || ||||| | ||||| || | || Sbjct 325 GGCCAACGAGATCAGCGCTATATCCCAGTCCCTCAAGGCCCTAGCGAAAGAGATGAAATG 266 Query 72371 ACCGGTGGTGGCATTGTCACAACTTAATCGATCGCTTGAACAGCGTGCGGACAAACGACC 72430 |||||||| || | || || || || ||| || || | || | | || || || Sbjct 265 CCCGGTGGTTGCGCTTTCCCAGCTCAACCGAGAACTGGAGCGACGGCCAAATAAGCGTCC 206 Query 72431 GGTAAATTCAGATTTACGTGAATCAGGAGCAATTGAGCAGGACGCAGACCTGATTATGTT 72490 | | || |||| | ||||| || || ||||| |||||||| |||||||||||||| Sbjct 205 GATCAACGCAGACCTGCGTGATAGCGGTGCGATTGAACAGGACGCGGACCTGATTATGTT 146 Query 72491 TCTGTATCGCGACGAAGTTTATCACCCGGATAGCGAAATGAAGGGCATTGCCGAGGTAAT 72550 | || || ||||| || || ||||| | |||||| || |||||||| || | || Sbjct 145 CGTCTACCGGGACGAGGTGTACCACCCTCAGAGCGAACACAAAGGCATTGCAGAAATCAT 86 Query 72551 TATCGGAAAGCAACGAAATGGCCCAATTGGCACGGT 72586 | |||| ||| || || ||||||| ||| || || Sbjct 85 TCTCGGCAAGGCGCGTAACGGCCCAACTGGGACCGT 50 >seq10525 Length=359 Score = 98.7 bits (108), Expect = 6e-16 Identities = 130/176 (74%), Gaps = 7/176 (4%) Strand=Plus/Minus Query 72256 TGATTATGATCGACTACCTGCAACTTATGCGCGTCCCCGAGCTGCA----AGATAACCGA 72311 |||| ||||||||||||||||| | |||| | |||| ||| || || | ||| Sbjct 174 TGATCATGATCGACTACCTGCAGTTGATGC-AGATCCCGGGCTCCAGCGGTGACAGCCGG 116 Query 72312 ACGCTGGAAATTGCCGAGATTTCTCGCTCACTGAAGGCGTTGGCGAAGGAATTACAAGT- 72370 || || ||| |||||||||| ||||| |||| || |||| |||||||| ||| | Sbjct 115 ACCAACGAGATTTCCGAGATTTCCCGCTCGTTGAAAGCCCTGGCCAAGGAATT-CAACTG 57 Query 72371 ACCGGTGGTGGCATTGTCACAACTTAATCGATCGCTTGAACAGCGTGCGGACAAAC 72426 |||||||| || |||| || || || ||||| ||||| |||||| || |||||| Sbjct 56 CCCGGTGGTTGCCCTGTCGCAGCTCAACCGATCTCTTGAGCAGCGTCCGAACAAAC 1 >seq6167 Length=616 Score = 96.9 bits (106), Expect = 2e-15 Identities = 223/331 (67%), Gaps = 9/331 (3%) Strand=Plus/Plus Query 21059 ACGCGGTGTAAACAAAGTCATCCTGATTGGTACCCTGGGGCAAGACCCGGAGATCAGGTA 21118 ||| ||| | ||||| |||||||| | || ||||| | || ||||| || | || Sbjct 200 ACGTGGTATCAACAAGGTCATCCTCGTCGGGCGTCTGGGCAATGATCCGGAAGTCCGTTA 259 Query 21119 TATACCAAATGGCGGCGCGGTCGGAAGACT-CAGCATCGCAACGAATGAATCATGGCGCG 21177 || || || || ||||| || | || || ||| |||| ||| ||| ||||| | Sbjct 260 CATCCCCAACGGGGGCGCAGTGGCAAACCTGCAGG-TCGCCACGTCAGAAAGCTGGCGTG 318 Query 21178 ACAAGCAAACGGGCCAACAGAAAGAGCAAACAGAATGGCATAAAGTCGTTTTGTTCGGAA 21237 |||| || ||||| | | ||||| || |||||||| || || ||||||| | Sbjct 319 ACAAACAGACGGGGGAGATGCGGGAGCAGACGGAATGGCACCGCGTGGTGCTGTTCGGCA 378 Query 21238 AACTTGCTGAAATTGCGAGTGAGTATTTACGAAAAGGTTCTCAGGTCTACATCGAAGGGA 21297 | || || ||| | || |||| ||| | || || || | |||||||||||||| ||| Sbjct 379 AGCTCGCGGAAGTGGCTGGTGAATATCTGCGCAAGGGCGCGCAGGTCTACATCGAGGGGC 438 Query 21298 AACTTAAAACCCGTAAGTGGACAGATGACGCCGGTGTAGAACGTTACACGACGGAAATTA 21357 |||| ||||||| ||| |||| | |||| | |||||| || |||||| Sbjct 439 AACTCCGTACCCGTAGCTGGGAAGATAA---CGGTATCACCCGTTACGTCACTGAAATTC 495 Query 21358 TCGTCA--GCCAGGGCGGCACCATGCAAATG 21386 | || | ||| | ||||||||||| ||| Sbjct 496 TTGTTAAGACCACG--GGCACCATGCAGATG 524 >seq12818 Length=238 Score = 95.1 bits (104), Expect = 7e-15 Identities = 92/117 (79%), Gaps = 1/117 (1%) Strand=Plus/Plus Query 61346 TTGGCATCCTCCACGCA-TAAAGGACGCGGATTTCTTCTACGTTCAGGTTGTAGCCTGAA 61404 ||| |||||||||||| | ||||||| |||| || ||||||||||| ||| ||||||| Sbjct 116 TTGACATCCTCCACGCCCTGAAGGACGTGGATCCCTGCTACGTTCAGGCTGTCGCCTGAA 175 Query 61405 TCATTTTGGTGATTTCCTGCTTCAATGGGCAGCCAAGCTTCACTCTCTATCAACTGG 61461 |||||| |||| |||||||||||| | || ||| || ||| ||| || || || Sbjct 176 TCATTTCGGTGGGTTCCTGCTTCAACGAGCGGCCTGACTGCACCATCTCTCCACAGG 232 >seq8153 Length=895 Score = 86.0 bits (94), Expect = 4e-12 Identities = 228/342 (67%), Gaps = 11/342 (3%) Strand=Plus/Plus Query 8426 GCCAGTTGATGCTGCTCCAGCAGGTGGCGGAAATTCATGATGGTGGTGCGGTCCGGCAAG 8485 ||||| | || | |||||||| | ||||||| || | |||||||| ||| || | | Sbjct 26 GCCAGCTCGTGTTTCTCCAGCAAGCGGCGGAAGTTGAGAATGGTGGTTTCGTCGGGGATG 85 Query 8486 GCGCTATCCAGGGATAACCGGGCAAACAGACGCATGGAGGCGATTTCGTACAGAGCATCT 8545 |||| ||||| | || ||||||| | |||| | | | |||||||||| || || Sbjct 86 -CGCT--CCAGGTTCAGCCCGGCAAACTGGCGCAGGATCGTGGTTTCGTACAGCGCTTCC 142 Query 8546 TCCATCGCGCCATCGCTCAGGTTGTACCAATGCTGCATGCAG-TGAATGCGTAGCATGGT 8604 |||||||| |||||| | | |||| | ||||| |||| || | || ||||| | Sbjct 143 TCCATCGCTGGATCGCTGTAGCCGAACCAGTTCTGCA-GCAGATGCACACGCAGCATCGC 201 Query 8605 TTCCAGCGGATAAG---GTCGCCGGCCATTACCAGCCTTGGGGTAAAACGGCTCGATGAC 8661 || |||||| | | || | ||| | ||| |||||| ||| ||||||||| | Sbjct 202 CATCAACGGATAGGCCGGACGACCGCCTTCACC---CTTGGGATAATGCGGCTCGATCAA 258 Query 8662 TTCCACCATGTTTTGCCATGGCAGAATCTGCTCCATGCGGGACAAGAAAATCTCTTTTCT 8721 | | || | ||| |||| | | | ||||| | || ||| | |||||| | Sbjct 259 GGCAATCAAACCCTTCCACGGCACCACCCGATCCATCTCGATCAGGAACAACTCTTTGCG 318 Query 8722 GGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGT 8763 ||| || |||||||| | | | || |||||||||||| Sbjct 319 GGTTTGTTTGCGCTTACCGGCGTACTCGGCGTCGGCGAAGGT 360 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 303185744423622