Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20deminutivum_20[genbank_20GCA_5F900092275.1_202017- 01-02] 13,382 sequences; 45,801,537 total letters Query= NC_006151.1 Length=143461 Score E Sequences producing significant alignments: (Bits) Value seq10128 116 3e-21 >seq10128 Length=369 Score = 116 bits (128), Expect = 3e-21 Identities = 165/227 (73%), Gaps = 5/227 (2%) Strand=Plus/Plus Query 94198 CACGGTCAGCGTCGTGTTCAGCAGCAGCACCCCGCGGCGCGCCCAGGCCTCCAGGCAGCC 94257 |||||||||| || || ||||||||||| || |||||||||| | | ||||||||| Sbjct 17 CACGGTCAGCACCGCATTGAGCAGCAGCACGCCCTGGCGCGCCCACGGCAGCAGGCAGCC 76 Query 94258 GTGGGC-GGGCGCGGGCAGCGTCGGGTACGTCGCCCGGACCGCCGCGAAGATGTTGGCCA 94316 |||| | |||||||| | | | ||| || | | || || | |||||||| || Sbjct 77 GTGGTCCGGGCGCGGA-ATCCCCAGGT-CGGCTTC--GATTTCCTTGTAGATGTTGAGCA 132 Query 94317 GGCTCGGGGGGATCGGCACCCCGCGCCGGACGCTGAAGGCCAGCCCGTGGGCCTGGCCCG 94376 | ||| || | ||| || ||| || || ||| ||| || ||||||||||||| Sbjct 133 GCGACGGCGGCACCGGGACGCCGGGCATCACCGAGAAACTCAGGCCATGGGCCTGGCCCG 192 Query 94377 GCCCGTGGTACGGGTCCTGGCCGATGATGACCACCTTGACGTCCTCG 94423 |||||||| ||||||||||| | ||| ||||||||||| | |||| Sbjct 193 CGCCGTGGTAGGGGTCCTGGCCCAGGATCACCACCTTGACCTGCTCG 239 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 458870429607120