Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20deminutivum_20[genbank_20GCA_5F900092275.1_202017- 01-02] 13,382 sequences; 45,801,537 total letters Query= NC_006949.1 Length=46900 Score E Sequences producing significant alignments: (Bits) Value seq3951 149 2e-31 seq10411 116 1e-21 seq7676 86.0 2e-12 >seq3951 Length=514 Score = 149 bits (164), Expect = 2e-31 Identities = 112/129 (87%), Gaps = 2/129 (2%) Strand=Plus/Plus Query 45141 TTATCTGCATCATCGTCTGCCTGTCATGGGCTGTTAATCATTACCGTGATAACGCCATCG 45200 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 386 TTATCTGCATCATCGTCTGCCTGTCATGGGCTGTTAATCATTACCGTGATAACGCCATTA 445 Query 45201 CCTACAAAGAGCAGCGCGATACCGTTACTCATA-AGCTGACGCTGGCGAACGCGACAATT 45259 ||||||||| |||||||| | | | || | | |||| ||||||||||||| ||||| Sbjct 446 CCTACAAAGCCCAGCGCGACAAAAATGC-CAGAGAACTGAAGCTGGCGAACGCGGCAATT 504 Query 45260 ACCGACATG 45268 || |||||| Sbjct 505 ACTGACATG 513 >seq10411 Length=590 Score = 116 bits (128), Expect = 1e-21 Identities = 140/185 (76%), Gaps = 4/185 (2%) Strand=Plus/Plus Query 46640 GCGTTGTATCGTCGCAGTATCACCGCATTAACAATGACCGCAGCCCTTAATGGGAGCTCC 46699 ||| ||||||||||| |||| |||||||||| ||||||| ||||| | |||| ||| Sbjct 332 GCGCTGTATCGTCGCCGTATTCCCGCATTAACCATGACCGTAGCCCG-ACGGGGAATTCC 390 Query 46700 TTCTGCGTGAGTGTGCAATGATAATCAATAACGATGCATACCGGGGTTTGCAGCTTTTAC 46759 |||||||||||||||| |||||||| ||||||||| |||||| ||| | | | || Sbjct 391 TTCTGCGTGAGTGTGCGGGAATAATCAAAAACGATGCACACCGGGTTTTACTGTGCTGAC 450 Query 46760 GATGGCTGGTTTATCCCTCATTGCTCGCCATCTCGATGCGGGGGTAGAAGAAATCGAGGG 46819 || || ||| ||||||| | |||| | || |||| ||| ||||||| || || Sbjct 451 AGACGCAGGGTTA-CCCTCATAG-TCGCTTTTCCGGTGCGATGGTGGAAGAAACCG-GGA 507 Query 46820 TGTTT 46824 ||||| Sbjct 508 TGTTT 512 >seq7676 Length=607 Score = 86.0 bits (94), Expect = 2e-12 Identities = 50/52 (96%), Gaps = 0/52 (0%) Strand=Plus/Plus Query 26342 ATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCAGTTAAA 26393 |||||||||||||||||||||||||||||||||||||||||||||| || || Sbjct 49 ATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTTCAA 100 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 149934569923208