Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20deminutivum_20[genbank_20GCA_5F900092275.1_202017- 01-02] 13,382 sequences; 45,801,537 total letters Query= NC_007022.1 Length=172963 Score E Sequences producing significant alignments: (Bits) Value seq426 129 6e-25 seq76 89.7 6e-13 >seq426 Length=230632 Score = 129 bits (142), Expect = 6e-25 Identities = 168/229 (73%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 6992 GCATGGTAAACAGCTTGGTTTGCCTGTGAACCGGAATGGGGTTGAACGTTTGCGAAATTG 7051 || |||||||| ||| ||||||||| || || ||||| || || |||||||| | ||| Sbjct 73690 GCGTGGTAAACGGCTGTGTTTGCCTGAGATCCAGAATGAGGCTGTACGTTTGC-ATATT- 73633 Query 7052 CAACT--AAACAGTTCTTTAGCACGCTCAATTGCCAGGTTCTCGATCTCATCGGCTTTTA 7109 || || ||| | ||| ||||| | ||||| || | | |||||| | || || | Sbjct 73632 CAGCTCCAAATAATTCCTTAGCTCTGTCAATAGCAATCTGCTCGATAACGTCAACTACTT 73573 Query 7110 CACAACCGCCGTAATACCGTTTGCCTGGATATCCCTCAGCATACTTGTTGGTAAAAATAG 7169 | ||||||||||| || | |||||| ||||||||||||||||| ||||| || |||| || Sbjct 73572 CGCAACCGCCGTAGTATCTTTTGCCAGGATATCCCTCAGCATATTTGTTAGTTAAAACAG 73513 Query 7170 AACCTTGCGCTTTCATAACATCATCGGACACATAGTTTTCGGATGCAAT 7218 | || |||| ||| || ||||| ||| | ||||| || || || Sbjct 73512 ACCCAGCTGCTTCCATTACCTCATCACTTACAAAATTTTCTGAAGCGAT 73464 >seq76 Length=330973 Score = 89.7 bits (98), Expect = 6e-13 Identities = 154/222 (69%), Gaps = 4/222 (2%) Strand=Plus/Plus Query 7001 ACAGCTTGGTTTGCCTGTGAACCGGAATGGGGTTGAACGTTTGCGAAATTGCA--ACTAA 7058 || ||| ||| ||||||| ||| || || ||||| || || | | ||| || | Sbjct 185186 ACCGCTGCGTTAGCCTGTGCACCTGAGTGCGGTTGTACATTGACCCAG--GCAGCACCGA 185243 Query 7059 ACAGTTCTTTAGCACGCTCAATTGCCAGGTTCTCGATCTCATCGGCTTTTACACAACCGC 7118 | |||| ||| ||||||||||| || | || || || ||||| | |||| || | Sbjct 185244 ATAGTTTTTTTGCACGCTCAATCGCTAAATTTTCAATTTCATCTACAACCTCACATCCAC 185303 Query 7119 CGTAATACCGTTTGCCTGGATATCCCTCAGCATACTTGTTGGTAAAAATAGAACCTTGCG 7178 | ||||| ||||||||||| || || ||||| || ||||| |||| ||||| | Sbjct 185304 CATAATAGCGTTTGCCTGGCAGGCCTTCCGCATATTTATTGGTTAAAACTGAACCAGCAG 185363 Query 7179 CTTTCATAACATCATCGGACACATAGTTTTCGGATGCAATCA 7220 ||| |||||| | | | || ||||||| |||||||||| Sbjct 185364 CTTCCATAACCTGTTTGCTGACGAAGTTTTCAGATGCAATCA 185405 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 553261037776560