Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20deminutivum_20[genbank_20GCA_5F900092275.1_202017- 01-02] 13,382 sequences; 45,801,537 total letters Query= NC_007145.2 Length=37639 Score E Sequences producing significant alignments: (Bits) Value seq3418 264 3e-66 seq9435 228 2e-55 seq12163 185 2e-42 seq1269 140 8e-29 seq3006 136 1e-27 seq2422 129 1e-25 seq7034 118 3e-22 >seq3418 Length=506 Score = 264 bits (292), Expect = 3e-66 Identities = 282/370 (76%), Gaps = 2/370 (1%) Strand=Plus/Plus Query 5011 CAGGAGGTCTACGGCCTGCCCGAGTATCTGAGCTCGCTGCACTCGGCCTGGCTGAACGAA 5070 |||||||| |||||||||||||||| || | |||| | || ||| ||||| Sbjct 129 CAGGAGGTGTACGGCCTGCCCGAGTGGATGCCGGCCGTGCAGGCCGCGCTGCTCAACGAG 188 Query 5071 TCGTCGACGCTGTTCCGGCGCAAGTATTACGAGAACGGCAGCCACGCCGGCTTCATCCTG 5130 ||| | |||||||||||||||||||| ||| | |||||| ||||||||||||||||| Sbjct 189 TCGGCCACGCTGTTCCGGCGCAAGTACTACAACAACGGCTCGCACGCCGGCTTCATCCTC 248 Query 5131 TACATGACCGACGCCGCG-CAGAAGCAGGACGACGTGGACAACATGCGCGACGCGCTGAA 5189 ||| ||||||| || | | ||| | | |||||| | | ||||||| ||||| || Sbjct 249 TACCTGACCGATTCCCAGGCGGAATC-GTCCGACGTAACCGGCCTGCGCGAGGCGCTCAA 307 Query 5190 GAACGCGAAGGGGCCTGGCAACTTCCGCAACGTGTTCATGTACGCGCCGGGCGGGAAGAA 5249 | || || || ||||||||||| ||| ||||| || | |||| ||| ||||| Sbjct 308 GGCGGCACGTGGTCCGGGCAACTTCCGGAACCTGTTCGTGCATTCGCCCAACGGCAAGAA 367 Query 5250 GGACGGCATCCAGCTCATCCCCGTGTCCGAGGTCGCCGCGAAGGACGAGTTCTTCAACAT 5309 ||||| | ||| ||||||| ||| |||||| || || ||||| |||||| |||||| Sbjct 368 AGACGGTCTGCAGATCATCCCGGTGAGCGAGGTGGCGGCCAAGGATGAGTTCGCCAACAT 427 Query 5310 CAAGAACGTGACGCGCGATGACCTGCTCGCCGCGCACCGCGTGCCGCCGCAGTTGCTTGG 5369 |||| |||||||||||| ||| |||| || |||| ||||||||||||||| ||||||| Sbjct 428 CAAGGGCGTGACGCGCGACGACATGCTGGCGGCGCTGCGCGTGCCGCCGCAGCTGCTTGG 487 Query 5370 CATCGTGCCG 5379 |||||||||| Sbjct 488 CATCGTGCCG 497 >seq9435 Length=520 Score = 228 bits (252), Expect = 2e-55 Identities = 310/430 (72%), Gaps = 3/430 (1%) Strand=Plus/Minus Query 740 CGATGTTTTCGGCCACGCAGCCGCAGCCGAAGTCTTCGACCACGTAGGCGTCGTTCGACG 799 ||||||| ||| ||| | ||| | |||| ||||||||||||||||| ||||||| |||| Sbjct 491 CGATGTTCTCGACCAGGGCGCCACGGCCGTAGTCTTCGACCACGTAGTCGTCGTTGGACG 432 Query 800 ATTCGTAGTTCTCGATGCGGTCGCGTTCCGGCACTTCCTTCAGCGTGCGCCGGCGCGCGC 859 | ||| ||||| | | ||||| | |||| || | || || ||||| || Sbjct 431 ACTCGAAGTTCGCCACGCGGTTCTTCTGCGGCTGCTCGATGAGGTAACGGCGGCGGCCGT 372 Query 860 CTTCCTGGTAGTAGATCGACAGATTTGACAGCTTCGTGACCATCAGCGCGCGCTTCGGGA 919 | ||| |||||||||||||||| |||| ||||||||||| ||| ||||| Sbjct 371 CGATCTGCCAGTAGATCGACAGATTGTCCAGCGAGGTGACCATCAGGGCGTTGGCCGGGA 312 Query 920 AGAACGGCACGCGCACGGCCGGCAGATTGCCGATGCGCTTCTGGCTCACGATCAGATCGG 979 ||| |||||| ||| | | |||| ||||||||||| || || | |||||| | Sbjct 311 CGAAAGGCACGATCACCGGCTGCAGGCCACCGATGCGCTTAGTGCCCAGCACCAGATCCG 252 Query 980 CCGCGAGCCGCTCGGTCGGCGCCTGCGTCGCGTTGACGATCGGGAAATACTTGTCGTGCA 1039 | || ||| |||||||||||||| | | ||||| ||| ||||| ||||||||||||| Sbjct 251 CGGCCAGCTGCTCGGTCGGCGCCAGGTCCTTGTTGATGATGGGGAAGTACTTGTCGTGCA 192 Query 1040 GCAGCTCGCGGCCGCAGATCACGACGAGGCCCGTGTCTTCCTGGAACCACGGGTCGATCA 1099 ||| | |||||| ||| || || | ||||| || | |||| |||||| ||||||| Sbjct 191 CCAGGTTGCGGCCCAGGATGACCACCAAGCCCGGATCCTGCTGGTGCCACGGCTCGATCA 132 Query 1100 TCGACGACACGATATCCATCACGAGCGCGTCGAGGTTCTCGTAATCGCCCGCCTTGCCGA 1159 | ||||| | |||||| || |||||||| ||||| |||| || | |||| | || Sbjct 131 GGGTGGACACCACATCCATAACCAGCGCGTCCAGGTTGGCGTAGTC-CGCGCC--GGCGC 75 Query 1160 CGAGCACCTT 1169 || |||||| Sbjct 74 CGCCCACCTT 65 >seq12163 Length=619 Score = 185 bits (204), Expect = 2e-42 Identities = 323/465 (69%), Gaps = 28/465 (6%) Strand=Plus/Minus Query 3458 TACCACGGCAACTTCTACTTCGACGAATACTTTTGGGTTCCGAAG--TTCCGCGAGCTGA 3515 |||||||| || |||||||||||||||| ||| ||| || | | ||| | |||||| Sbjct 613 TACCACGGGAATTTCTACTTCGACGAATTCTTCTGGA--CCTACGGCTTCAACCAGCTGA 556 Query 3516 ACAAGGTCGCCTCCGGCATGGCGATGCACAAGCGCTGGCGCAAGACGTACTTCAGCACGC 3575 ||||||||||| ||||||||||||||||||| ||||||||||| ||||||||||||| Sbjct 555 ACAAGGTCGCCAGCGGCATGGCGATGCACAAGAAATGGCGCAAGACCTACTTCAGCACGC 496 Query 3576 CGTCCAGCGTCACGCACGAGGCGTACGCGTTCTGGAGCGGCGCGCACGCGAACCGCGGCC 3635 | |||| | | ||||||| || |||| ||||||| |||| || | || | || | Sbjct 495 CTTCCACCATGGCGCACGAAGCCTACGATTTCTGGACAGGCGAGCGCTTCAA-CAAGGGC 437 Query 3636 GCGCCG-CGGGCGAGC--GCATCCAGATCGACACGAGCCACGAGGCGCTCGTGCGCGGCA 3692 |||| | | ||| | ||| |||||| ||||||| ||| | | ||| Sbjct 436 AAGCCGACCTCCCAGCAGGTATC--GATCGATGTCAGCCACGGCCGGCTGGGCAGTGGCC 379 Query 3693 TGTTGTGCGAGGACGCGCAGTGGCGGCAGATCGTGACCGTGCTCGATGCGATGGCGGGCG 3752 ||||||||||| |||||||||||||| || |||||||| ||| | | | Sbjct 378 GACGCTGCGAGGACGCTATCTGGCGGCAGATCGTCACAGTGCTCGACGCGGCCGACCGAG 319 Query 3753 GCTGCGACCTGTTCGACATCGACGAGCTGCGCCGCGAGTACAGCGCCGAGGAATTCGCGA 3812 | ||||| |||||||| | | ||||||||||||||||||| | Sbjct 318 GGTGCGATCTGTTCGA----------------TGTGGNNACAGCGCCGAGGAATTCGCCA 275 Query 3813 ATCTGCTCATGTGCCAGTTCATCGACGA-TTCGCTGTCGGTGTTCAAGCTGTCGGACCTG 3871 | ||||| |||||| ||||| | ||||| ||| | |||||| |||| || ||| Sbjct 274 ACCTGCTGATGTGCGAGTTCGTGGACGACAGCGCCAGC-GTGTTCCCGCTGACGATGCTG 216 Query 3872 CAACGCTGCATGGTCGACTCGTGGGAAGAATGGGCGGACGACTTC 3916 || | ||| ||| ||| |||| || ||||| | ||| ||| Sbjct 215 CAGCCGTGCCAGGTGGACAGCTGGGTGGAGTGGGCCGGCGAGTTC 171 >seq1269 Length=1066 Score = 140 bits (154), Expect = 8e-29 Identities = 275/398 (69%), Gaps = 19/398 (5%) Strand=Plus/Minus Query 2169 GGTGCCGAGGCTCGCCGGGTCGTCGGTCGCCGCGAGCCCGACGAGATACGCCTCGCCGAT 2228 ||| |||| ||| ||||| || ||| | | || ||| || || |||| |||| | Sbjct 927 GGTTCCGATGCTGGCCGGCGAATCCGTCACGCCCAGGCCGTACAGGTAGGCCTTGCCGCT 868 Query 2229 GTCGGCGAAGTCGGGGTTGATCTCGATCGACGTGAAGAGCTTCTG---GCGCTTCTTCGA 2285 |||||| || || ||| |||||||| ||||||| |||||| |||| || || Sbjct 867 GTCGGCAAATTCCGGGGCAATCTCGATGCTGGTGAAGACCTTCTGCTTGCGCACGTT-GA 809 Query 2286 CAGTG-CGACGAGCTCGTCGGTCGGATCGATCTGCGCATACAGCGCCATCTTCCCTTTCA 2344 | || |||| || || ||||||| |||| ||| || ||||||||||||| ||| Sbjct 808 CCATGTCGACCAGGTCAGCGGTCGGGTCGACCTGGGCGAACAGCGCCATCTT--CTTCTT 751 Query 2345 GCGGGCCGTCTTCGATCTCGGCTGCCTTCAGCGCGATCACGTCGCCATACGCGCCGAACG 2404 || || || ||||| || | ||||| | ||||| ||||||||| || |||| ||||| Sbjct 750 GCCGG-CGATTTCGACTTCTTCGGCCTTGACCGCGACCACGTCGCCGTAGGCGCGGAACG 692 Query 2405 GGTTGTTCGCCGACAGCGGCGCCCAGCCCTTGATGTGCTCGACGTTCACGCGTGCGCCGT 2464 || ||| || || |||| | || | |||||| | | || ||||||| Sbjct 691 GGCTGTCCG------GCAGCGCGCTGC---GGTAGTGCTCCATCCAGATCCGGGCGCCGT 641 Query 2465 ACAGCTTCGGGTCGTAGTGCTTC-GCCATCTGCGTGAGCCATTCACGCTTGATCTCGCGA 2523 | | || |||||||||| | ||| ||||| | | || | | |||| |||| |||| Sbjct 640 AGACCTCCGGGTCGTAG-GTTTCAGCCATTTCCACGATCTGCTGGCGCTCGATCACGCGG 582 Query 2524 CCGTCGACGGTCGCGCCTTCCACTGCGACGCGGAAGAA 2561 || ||| ||| |||||||| || || || |||||||| Sbjct 581 CCATCGGTGGTGGCGCCTTCGACAGCCACACGGAAGAA 544 >seq3006 Length=629 Score = 136 bits (150), Expect = 1e-27 Identities = 339/517 (66%), Gaps = 18/517 (3%) Strand=Plus/Minus Query 25240 GCGCGCCGGGAAATCGGCGAGGAAGCGGTCGGTGATGCGCTGGCGCAGCACCAGATTTTC 25299 ||| | |||||||||||||| |||||||||||||||||||| ||||| ||| ||||| Sbjct 526 GCGGGTCGGGAAATCGGCGAAATAGCGGTCGGTGATGCGCTGGTTCAGCAGCAGGTTTTC 467 Query 25300 GAGAGGCGGAACCGGCGTGTAGTCGTAATCGATGTACGCCTTGCCGG-ACGCGAGAAT-- 25356 || ||||| ||||| ||||||||| | |||||| ||| || || || | Sbjct 466 CAGCGGCGGCACCGGGGTGTAGTCGAAGTCGATG---GCCAGGCGACCACTGGACAGCTG 410 Query 25357 -GTCGGCCGTGTTCGGCTCCGGATCGATCCACGCGCTACCGCCGATCAGGTAGCCGTTCG 25415 || ||| | ||| | || ||| ||| || | | |||| |||||| ||| | Sbjct 409 CGTGGGCAG-GTTGGCGCCCTCGTCGTACCAGGCCGTGGCCCCGAGCAGGTATCCG---G 354 Query 25416 CG---ACCTGCTGCCGAAACCAGCCGTTGATGCTTTCCACGATGTCGCGCGCGAGCGACG 25472 || ||| ||| || | ||| | ||||| | Sbjct 353 CGTTCACCAGCTCGCGCTAANNNNNNNNNNNNNNNNNNNNNNN----CGCACCAGCGAGG 298 Query 25473 GATTCAGCGGGCCGTCGACGACGGGCATCTGCGCTTCGGCGATCGAATCGCCGGCCACCT 25532 | | |||||| ||||||| | || |||||| |||||||| | ||| | | || Sbjct 297 GGTGCAGCGGCTTGTCGACGTAGACCAACTGCGCCTCGGCGATGGTGTCGGCCAGGATCT 238 Query 25533 GAGCGGTGCGCGTGTAGTTCTCGAACGCGAACTTCGGATCGTCCGAGCACGTGCGCTCGC 25592 | || ||||| ||| || ||||||| || ||| ||| || || ||| |||||| | Sbjct 237 GCGCCGTGCGGGTGGAGGTCTCGAAGGCAAACAGCGGCTCATCGCTGCAGGTGCGCGATC 178 Query 25593 CCCAGAACCGGAAGCCGTTGCGGTTCACGAGCGTCGTCACTTCGTGCTCGTTCAGGTAGC 25652 |||||||| | | |||||| ||| | ||||| || | ||| | || || || Sbjct 177 CCCAGAACTTGTACCCGTTGGAGTTGATCAGCGTGGTGATATCGGCGGCATTGAGCATGC 118 Query 25653 CCGCATCGGTCGCCGGGTCCTGCAAATCCCACGACACGTCGGCGCTGATGCCGGACACGC 25712 | || ||||||||||| ||||||| ||||| ||||| ||||||||||| ||||| Sbjct 117 CGGCGTCGGTCGCCGGATCCTGCAGGTCCCAATGGACGTCCCGGCTGATGCCGGTCACGC 58 Query 25713 CGTTCACGACGACATTCGAAATCGTCTTGTGCCAGCC 25749 || ||| | || || || | || ||| |||||||| Sbjct 57 CGGCTACGGCCACGTTGGACAGCGACTTATGCCAGCC 21 >seq2422 Length=594 Score = 129 bits (142), Expect = 1e-25 Identities = 184/257 (72%), Gaps = 4/257 (2%) Strand=Plus/Minus Query 4171 CCAGCTCGTGCGCAAGTTCTTCCCGGCCGCCGTCGCGCTGAACTACTCGCCCGAGGTGAA 4230 |||||| || ||| |||||||||||| | | | | |||||||||||||||||| Sbjct 591 CCAGCTGGTCCGCCAGTTCTTCCCGGGGTTGACCACCTTCAGCTACTCGCCCGAGGTGAA 532 Query 4231 AACCCGCCTCGTGCTCAAGGGCCAGTCC--GTCGTCCGGAACGGCCGCCTGCAATTCGAC 4288 || || || |||||||||| | || ||| || ||||| || ||| ||| ||| Sbjct 531 GACGCGGCTGGTGCTCAAGG--CGTTCGATGTCATCAAGAACGAGCGTCTGGAATATGAC 474 Query 4289 GCGGGCTGGACCGATCTGGCGGCGGCGTTCATGGCGATCAAACAGACGATGACGGCGAGC 4348 || ||||||||||| || | | || | | || ||| | |||| | ||||| ||| Sbjct 473 GCCGGCTGGACCGACATGACCCAGTCGCTGCTTGCCATCCAGAAGACCAGCACGGCCAGC 414 Query 4349 GGCCGTCAGGCGACCTACACCGCCGGCCGCACCGACGAGACGGGCCACGCCGACCTGGCG 4408 ||||| ||| | |||||||| || || ||| | | ||| ||||||||||| |||||| Sbjct 413 GGCCGACAGACCACCTACACGGCGGGGCGCTCGCGCACGACCGGCCACGCCGATCTGGCG 354 Query 4409 TGGGCGTGCCTGCACGC 4425 |||||| ||||| || Sbjct 353 TGGGCGCTGCTGCATGC 337 >seq7034 Length=996 Score = 118 bits (130), Expect = 3e-22 Identities = 463/702 (66%), Gaps = 39/702 (6%) Strand=Plus/Plus Query 19807 CGTCGATTTCCGGTTTGAAGCCTGACACGGTCACGGGCATTTCCGGGAACAGTTCGGCGC 19866 |||| ||||||||||||||||| | |||||||| | | ||||||| | | ||||||| Sbjct 15 CGTCAATTTCCGGTTTGAAGCCGGTGACGGTCACCGTCTGTTCCGGGTAGATATCGGCGC 74 Query 19867 GGCCGCGCGCGAGCGTGTAGCTCATCGTCGCCTGGCTGCGCTGCATCCGCTTGAACTCCG 19926 |||| |||||| |||||||| ||| || || | || || ||||| || | Sbjct 75 GGCCCAATGCGAGCCGGTAGCTCAGTTGCGCGGTGCCCCGATCCAGTCGTTTGAATTCGG 134 Query 19927 CTTGCGCG-GCAGCGCGCGCTTCCGCCTCCGTTGCGTAGTCTTCCGGCAGCACCTTCACG 19985 | | |||| || | ||||||||| || |||| |||||| || | ||| |||| || Sbjct 135 CCTCCGCGTGCTG-ACGCGCTTCCTCCGCCGTGGCGTAGGTGGCCTGTAGCTTCTTCTCG 193 Query 19986 TTCT-TGTTGTTCTCGCCGCCGACGATGAC-CGACTTCCGCT-TCGCGCGGCCGGTCGAA 20042 |||| || || | | || | ||| || |||| | ||| | |||| ||| | || Sbjct 194 TTCTCTGGCGTGCCCACCAGC-ACGCCCACGCGACGT--GCTGCCTTGCGGTCGGCCCAA 250 Query 20043 TGGTAGTGCGCGCGCACGGCCGCGTAGTTCTCGCGTTCGGACACGTGGTAACGATGACTG 20102 | | |||||||| | | ||| |||||||| |||| ||| ||| || || ||| Sbjct 251 TAG------GCGCGCACACCGGTGTATTTCTCGCGGTCGGCAACGCTGTAGCGGTG-CTG 303 Query 20103 -TCGCCGCTCGCGCGCGTCAGTTCGAGCACGTCG---AGCTGCTTTCCGCTCGCCGTCTG 20158 ||||| ||| ||||| | || ||||| || ||| ||| ||||| || ||| Sbjct 304 ATCGCCCGACGCACGCGTGATTT---GCACGCCGGGCAGCGGCTGGCCGCTGGCGGTCGT 360 Query 20159 GCCGGTGCCGATCGGC---ATGAACAGCAAGCGTAGATCCTTCACGTTCATGACGGCGTC 20215 ||||| || ||| ||| | || |||| || | |||| || | | | || Sbjct 361 GCCGGCGCAGATGGGCGCAAAGATCAGC--GCCCCG-GCCTTGAC---CGTTGCCTNNTC 414 Query 20216 GTAGCGCTTCGCCAGACGCGTAAGAAACGACATGTCCGATTCGTGCGTCTGGTCGATGTG 20275 | |||| | |||| || || || | || || ||||| | |||||||| ||| Sbjct 415 GAAGCGACGCCCCAGCCGGGTGAGCAGGTTGATATCGCTTTCGTTGGCCTGGTCGAGGTG 474 Query 20276 CGCGATCAGGATCTTCGCGAGCGCGTCGCCGA-CGATCGGCGCCAGCGAGTAGCGC-CCG 20333 | || ||| | || || | || ||| | | |||| ||| || | || | || Sbjct 475 GGGGACTGCGATGCTGGCCAGATCCGCGGCGATGGCTGGGCG-CAGTGAAT-GCTCGCCC 532 Query 20334 GCGATCGCGTGGACGATCGAGCCGATCGT-CTGCCGATGCCAGCTCTTCTCGCGGC-GCT 20391 ||||| || || || ||| | || || || |||||||| ||||| | ||| Sbjct 533 GCGATGGCACCGAGAATGTCGCCCAGGGTGGTGTCG-TGCCAGCTGCGTTCGCGCCGGCT 591 Query 20392 CCTGCATGCCGCTCGTCATCGCGGCCGAGCGCGCGCGGATGGTGATGATGTCCGGCGCGC 20451 | | | | | | || | |||| |||||||| ||||| |||| ||||| ||||||| Sbjct 592 GC-GGACGGCACCGGTGAGGTCGGCAGAGCGCGCACGGATCGTGAGAATGTCAGGCGCGC 650 Query 20452 CGCTGTGCTCGACTTCGTTCACAACGAAGCTGCCCTTGTCGA 20493 |||||||||| || |||| || || || ||||||| |||| Sbjct 651 CGCTGTGCTCCACGTCGTCAACGACAAACGTGCCCTTCTCGA 692 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 120304079289884