Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20deminutivum_20[genbank_20GCA_5F900092275.1_202017- 01-02] 13,382 sequences; 45,801,537 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq1158 95.1 1e-14 >seq1158 Length=25781 Score = 95.1 bits (104), Expect = 1e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | ||||| || || || ||||| || | |||||| | || | || Sbjct 9251 ATGCAAATCTTTGTCAAGACCTTGACTGGTAAGACCATCACCCTTGAGGTTGAGGGTTCT 9192 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 || ||||||||| | ||||| |||||| ||||| || || || || ||||||||| Sbjct 9191 GATACCATCGAGAACGTCAAGACCAAGATTCAAGACAAGGAGGGTATCCCACCCGATCAA 9132 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 ||| | ||||| | | || || ||||| || || | | | | | | |||||| ||| Sbjct 9131 CAACGTCTCATCTTTGCTGGTAAGCAACTTGAGGACGGTCGTACCCTTTCCGACTACAAC 9072 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 || ||||| || || ||| ||||||| ||||| Sbjct 9071 ATCCAAAAGGAGTCCACTCTCCATCTCGTCCT 9040 Score = 87.8 bits (96), Expect = 2e-12 Identities = 102/138 (74%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 26828 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCA 26887 ||| ||||||||| | ||||| |||||| || || || || || || |||||||| Sbjct 9420 CGATACCATCGAGAACGTCAAGACCAAGATTCAAGATAAGGAGGGTATCCCACCCGATCA 9361 Query 26888 ACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAA 26947 |||| | ||||| | || |||||| |||||||| |||| | | | || ||| || || Sbjct 9360 ACAACGTCTCATCTTCGCCGGCAAGCAACTCGAGGATGGTCGCACTCTCTCCGATTACAA 9301 Query 26948 CATTCAAAAAGAATCTAC 26965 ||||||||| || || || Sbjct 9300 CATTCAAAAGGAGTCAAC 9283 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478582331747040