Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20deminutivum_20[genbank_20GCA_5F900092275.1_202017- 01-02] 13,382 sequences; 45,801,537 total letters Query= NC_007497.1 Length=44856 Score E Sequences producing significant alignments: (Bits) Value seq368 111 5e-20 >seq368 Length=91977 Score = 111 bits (122), Expect = 5e-20 Identities = 218/314 (69%), Gaps = 20/314 (6%) Strand=Plus/Plus Query 39258 GCAGGCCGCCGCCGACGCGCTTCGTCGTGTAGAACAGTACGTACGGCTTCGCCGTGTACG 39317 ||| ||||||||| |||||||| || || |||||||| ||||| || || || | || | Sbjct 86942 GCACGCCGCCGCCCACGCGCTTGGTGGTATAGAACAGCACGTAGGGTTTGGCGGAATAGG 87001 Query 39318 GATCGCGCAGCACGCGAACCCCGATGCGGTCGATGATCAGATACGTCTGCTGGAAGTCGC 39377 |||||||||| || || |||||| |||| || | | |||||| | | ||| |||| Sbjct 87002 GATCGCGCAGGACCCGCACCCCGGTGCGATCCACCACCAGATAACCCCGGGCGAAATCGC 87061 Query 39378 CGAAGAGAATCGGCGTCGAGTTCGCCGCC-----ACATC--CGGCATGTCCGGCACCTCG 39430 ||||| ||| ||| || ||||||| |||| ||||| | | ||| Sbjct 87062 CGAAGGCAAT-GGC----AG--CGCCGCCGGTTGTCATCGGTGGCATCGCTTCTGCTTCG 87114 Query 39431 GT-AACCGGATAGCCCGCCAGCGTCGCCGGCTGCCCCGCTACGTACGACGGTTGCCAGAG 39489 || | ||||| ||||| ||| | ||| |||| || | | | | ||| |||||| Sbjct 87115 GTCAGCCGGA-AGCCCAGCAGTGAGGCCTGCTGGCCGGGTGCTGCGGGCGGCGTCCAGAG 87173 Query 39490 ATAGTTCCCTTGGCCGTCCTTCAGCTTCCGCAC--CTGACGCTGCGTGTTGCGGTTCATC 39547 |||||| || | |||||| ||||| ||||| ||| |||||| |||||||||||| Sbjct 87174 ATAGTTGCCGTCATTGTCCTTGAGCTTGCGCACGGCTG--CCTGCGTCTTGCGGTTCATC 87231 Query 39548 GCGAAGCGGGCGTT 39561 | ||| ||| || Sbjct 87232 ACCCAGCTGGCATT 87245 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 143394809329912