Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20deminutivum_20[genbank_20GCA_5F900092275.1_202017- 01-02] 13,382 sequences; 45,801,537 total letters Query= NC_007710.1 Length=46643 Score E Sequences producing significant alignments: (Bits) Value seq11319 282 1e-71 seq9518 168 2e-37 >seq11319 Length=362 Score = 282 bits (312), Expect = 1e-71 Identities = 245/302 (81%), Gaps = 4/302 (1%) Strand=Plus/Plus Query 35435 CAGTCCTTGCAGGTGAAGTTGCTCGACCCGCGTTTCGGCGATCTGTGGCCGTTGCCGGCC 35494 ||| | |||||||| ||| ||||||| ||||| ||||||||| |||||| |||||||| Sbjct 63 CAGCCGTTGCAGGTCAAGCTGCTCGATCCGCGCTTCGGCGATACCTGGCCGCTGCCGGCC 122 Query 35495 TATGCCACCGAAGCCAGTGCAGGCATGGACCTGCGTGCCGCACTGGAGGCGCCGA--TGA 35552 ||||||||||| ||| || || |||||||||| || || ||||| |||| | | Sbjct 123 TATGCCACCGAGCACAGCGCCGGGCTGGACCTGCGCGCGGCGCTGGA--AACCGAACTCA 180 Query 35553 CGTTGCAGCCGGGCGATGCGGCGCTGATTCCCAGCGGCATCGCGATCCATCTGGCCGACC 35612 | |||||||||||||| ||||||||||||||||||| ||||| ||||| | ||||||| Sbjct 181 CTCTGCAGCCGGGCGATACGGCGCTGATTCCCAGCGGTATCGCCATCCACATCGCCGACC 240 Query 35613 CGCAGCTGTGCGCGGTGATCCTGCCGCGCTCGGGGCTTGGCCATCGTCACGGCATCGTAC 35672 || | ||| ||| ||| | |||||||||||||| || |||||||| ||||||||||| | Sbjct 241 CGAACCTGGCCGCCGTGGTGCTGCCGCGCTCGGGCCTGGGCCATCGCCACGGCATCGTGC 300 Query 35673 TCGGCAACGGTACCGGCCTCATCGATGCGGATTACCAGGGGTCGTTGTTGATCAGCACCT 35732 | |||||||| ||||| || ||||| || ||||||||||| || || |||||||| ||| Sbjct 301 TGGGCAACGGCACCGGGCTGATCGACGCCGATTACCAGGGCCCGCTGCTGATCAGCGCCT 360 Query 35733 GG 35734 || Sbjct 361 GG 362 >seq9518 Length=499 Score = 168 bits (186), Expect = 2e-37 Identities = 159/202 (79%), Gaps = 2/202 (1%) Strand=Plus/Plus Query 35715 CGTTGTTGATCAGCACCTGGAATCGCGGCCGCGAGGCCTTCACCATCGAGCCGGGCGACC 35774 || || |||||||| ||||||| |||||||||||| ||||||| | |||||||||||| Sbjct 2 CGCTGCTGATCAGCGCCTGGAACCGCGGCCGCGAGCCCTTCACGCTGCAGCCGGGCGACC 61 Query 35775 GGATTGCGCAGCTGGTGATCCTGCCGGTCGTGCGCGTAGGCTTGCGAGTGGTGGACACTT 35834 | || ||||||||||| | ||||| ||| |||||| || ||| || ||||| |||| Sbjct 62 GCATCGCGCAGCTGGTTGTGCTGCCCATCGCACGCGTAAGCCTGCAGGTAGTGGATACTT 121 Query 35835 TCGTCGACAGCGCGCGCGGCGCGGGTGGATTCGGTCACACCGGCGTGCGCTGAC--TGGC 35892 || ||||||||| | || ||||||||||||| || ||||| |||||||||| || Sbjct 122 TCACCGACAGCGCCAGGGGAACGGGTGGATTCGGCCATACCGGGGTGCGCTGACCAGGGG 181 Query 35893 TAAGTCAGATGAGCAAGGCCAA 35914 |||| ||||||||||| || Sbjct 182 GAAGTTCCATGAGCAAGGCGAA 203 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 149112300611820