Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20deminutivum_20[genbank_20GCA_5F900092275.1_202017- 01-02] 13,382 sequences; 45,801,537 total letters Query= NC_007805.1 Length=39199 Score E Sequences producing significant alignments: (Bits) Value seq3695 109 1e-19 >seq3695 Length=1939 Score = 109 bits (120), Expect = 1e-19 Identities = 191/278 (69%), Gaps = 0/278 (0%) Strand=Plus/Plus Query 959 ATTCGCGATGTTCCGGTGCTGCTGGCGCTGGCCCCATGGTATGGCCGCAAGCATAGCGAC 1018 || |||||| ||||| ||||||||||||||| || ||||||||| ||||| | || Sbjct 168 ATCCGCGATATTCCGTCGCTGCTGGCGCTGGCTCCGTGGTATGGCAAAAAGCACCGGGAT 227 Query 1019 AACACGCTCGACACCAAGGTGTTTGCAAACCGGCGGACCCTTTGGACGCTCGGCGGCAAG 1078 ||||||||| | ||| ||| | || | || | | ||| || ||||| || Sbjct 228 AACACGCTCACTATGAAGCGTTTTTCCAATGGTCGTGGCTTCTGGTGCCTGGGCGGTAAA 287 Query 1079 GCTGCTCGCAACTACCGTGAGAGATCTGCCGACGAGGTGATCTATGACGAGCTGTCGAAG 1138 || || ||||||||||| | || | || | || | ||||| || || | Sbjct 288 GCGGCAAAAAACTACCGTGAAAAGTCGGTGGATGTGGCGGGTTATGATGAACTTGCTGCC 347 Query 1139 TTCGACGCCGATATTGAAGGTGAAGGTTCCCCAACGTTCCTTGGCGACCAACGTCTGCGC 1198 || || | ||||||||| ||||| || || ||||||||||||||| ||||| | Sbjct 348 TTTGATGAGGATATTGAACAGGAAGGCTCTCCGACGTTCCTTGGCGACAAACGTATTGAA 407 Query 1199 GGTGCTGTTTACCCGAAGTCCATCCGTGGATCGACGCC 1236 || | || | || |||||||||||||| || ||||| Sbjct 408 GGCTCGGTCTGGCCAAAGTCCATCCGTGGCTCCACGCC 445 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 125295286004924