Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20deminutivum_20[genbank_20GCA_5F900092275.1_202017- 01-02] 13,382 sequences; 45,801,537 total letters Query= NC_008207.1 Length=153766 Score E Sequences producing significant alignments: (Bits) Value seq93 87.8 2e-12 seq10414 82.4 8e-11 >seq93 Length=584700 Score = 87.8 bits (96), Expect = 2e-12 Identities = 65/76 (86%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 95142 ATGCGAAGGTAGCTCAGCTGGCAGAGCGCCACCTTGCCAAGGTGGAGGTCGCGGGATCGT 95201 ||||||| |||||||| ||| ||||||| ||||||||||||| ||||||||||| ||| Sbjct 584427 ATGCGAAAATAGCTCAGTTGGTAGAGCGCGACCTTGCCAAGGTCGAGGTCGCGGGTTCGA 584486 Query 95202 AACCCGTTCTTCGCTC 95217 |||||| ||||||| Sbjct 584487 GCCCCGTTTTTCGCTC 584502 >seq10414 Length=692 Score = 82.4 bits (90), Expect = 8e-11 Identities = 68/83 (82%), Gaps = 0/83 (0%) Strand=Plus/Minus Query 90074 CCACGGGGTGTAGTTCAGTTTGGAAGAGCGCTTGGTTTGGGACCAAGATGTCGCAGGTTC 90133 || ||||| |||| ||||||||| ||||||| | ||||||| | || ||||||||||| Sbjct 503 CCCCGGGGCGTAGCTCAGTTTGGTAGAGCGCCCGCTTTGGGAGCGGGAGGTCGCAGGTTC 444 Query 90134 GAATCCTGTCACCCCGACTCAGC 90156 | ||||||| ||||||| |||| Sbjct 443 AACTCCTGTCGCCCCGACACAGC 421 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 491840913546720