Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20deminutivum_20[genbank_20GCA_5F900092275.1_202017- 01-02] 13,382 sequences; 45,801,537 total letters Query= NC_009237.1 Length=37446 Score E Sequences producing significant alignments: (Bits) Value seq3078 105 2e-18 >seq3078 Length=957 Score = 105 bits (116), Expect = 2e-18 Identities = 202/290 (70%), Gaps = 12/290 (4%) Strand=Plus/Plus Query 25558 CAGCTCGACGATTACTTCACGGCGTCCTTCAACCCCTTGCCGGCCTTGAACTTCGGCGCT 25617 |||| | || ||| || ||||| ||||||| | ||||| ||||||||| ||| Sbjct 105 CAGCAAGCCGCTTAGTTTACGGCATCCTTCAGGGCTTTGCCAGCCTTGAACGACGGATTG 164 Query 25618 TTCGACGCTGGAATCTTGATTTCTTCGCCGGT-TGCGGGATTGCGTCCGGTGCGGGCGGC 25676 ||||| || | |||||||| |||||||| | |||| ||||| ||||||||||| || Sbjct 165 TTCGATGCAGCGATCTTGATGGTGTCGCCGGTCTTCGGG-TTGCGGCCGGTGCGGGCAGC 223 Query 25677 CCGCGCGCCCACGCTGAATACG--CCGAATCCCGTCAGCGTCACCGTGT---CGCCCTTG 25731 ||||||| || ||| | ||| ||||| ||| ||||||||| | || ||||||| Sbjct 224 ACGCGCGCGAAC-CTGGA-ACGTACCGAAGCCCACCAGCGTCACAGCGTCACCGCCCTT- 280 Query 25732 CGCAGCGACTTCGTGATGCCTTCGAGAACGGCTTCCAGCGCAAAGCCGGAGTCGGCTTTC 25791 ||| | ||| |||||| ||| ||||| || | || | ||| ||||| || Sbjct 281 --CAGGGCCTTGGTGATGGAAGCGATGACGGCATCGACGGCGCGGTTGGACTCGGCCTTG 338 Query 25792 GTCAGGCCCGTTTCCGCTGCCACGTGATTGATCAGGTCCGATTTGTTCAT 25841 |||||| | | || | || ||| | ||||| || | |||||||| Sbjct 339 GTCAGGTCGGCGGCCTCGGCAACGGCGTCGATCAATTCGGTCTTGTTCAT 388 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 119686577433472