Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20deminutivum_20[genbank_20GCA_5F900092275.1_202017- 01-02] 13,382 sequences; 45,801,537 total letters Query= NC_009816.1 Length=70579 Score E Sequences producing significant alignments: (Bits) Value seq6165 244 5e-60 seq7222 120 1e-22 >seq6165 Length=651 Score = 244 bits (270), Expect = 5e-60 Identities = 342/473 (72%), Gaps = 10/473 (2%) Strand=Plus/Minus Query 59910 TCATCGAACATAAGGTAAGGATAGCCAGACTCAAACTGAACCTCTGCGATGGTCTGGAAC 59969 || |||||||| | ||| || ||||| ||||| ||||| | ||| |||| ||||||||| Sbjct 468 TCTTCGAACATGACGTACGGGTAGCCGGACTCGAACTGGATCTCGGCGACGGTCTGGAAG 409 Query 59970 AGCTTTCGAGCGTCGATAAAGGTCTTAGCGATCCTATCATCTTTTAGCCACGTGTCGTAC 60029 | || || |||| ||| |||||| ||| | || | | | | | |||| Sbjct 408 AACTCGCGCGCGTTGATCTTGGTCTTCTTGATGCGCGGGTCGTCGACCATCTCGCGGTAC 349 Query 60030 ATCTCGGTTACGGAGAACTCG--GACAGTGACTTTCCGTACACCTTATTGATGTCATAAG 60087 ||||||| || |||| ||| || | || ||||| ||||| | || ||| || | Sbjct 348 TTCTCGGTGACCGAGATGTCGCCGAACGGAACG--CCGTAGACCTTCTCGACGTCGTACG 291 Query 60088 GAGAGAATAGGGCCATAGGCTCGCTCTCCTTGGCAAGGCGGAACGTGACATCAGGAACGA 60147 | ||||| ||| ||| |||| | |||||| || |||||||| || ||||| | Sbjct 290 GCGAGAACAGGTACATGTCCTCGTCGTTCTTGGCGAGTTCGAACGTGATGTCCGGAACCA 231 Query 60148 TAACTCCTAGGGAGAGAGTCTTAATACGGATCTTCTCGTCGGCGTTTTCACGCTTGGTAT 60207 || || || || || ||||| || ||||||||||| |||||||| || |||||||| | Sbjct 230 CGACGCCCAGCGACAGCGTCTTGATGCGGATCTTCTCATCGGCGTTCTCGCGCTTGGTGT 171 Query 60208 CCAGGAA-CGCAAGGATGTCGGGGTGGTGTGCGTTCAAATATACCGCCCCTGCGCCCTGC 60266 | ||||| |||| | |||||||||||||| ||||| | || ||||| || |||||||| Sbjct 170 CGAGGAAGCGCATG-ATGTCGGGGTGGTGGGCGTTGAGGTACACCGCACCGGCGCCCTGA 112 Query 60267 CTTGCACCCAGTTGGTTAGAGTAGGAGAAGCTATCTTCTAGAATCTTCATCACAGGGATG 60326 | ||||| || ||||| | |||| |||||| ||||| || | ||||||||| |||||| Sbjct 111 CGCGCACCGAGCTGGTTGGCGTAGCTGAAGCTGTCTTCGAGGAGCTTCATCACGGGGATG 52 Query 60327 ACTCCAGAGGCCTGACCTTCTCGACC--CTTAATCGGAGCTCCTGCCTCGCGG 60377 | || |||| ||| ||||||| | ||| ||||| || || | ||||||| Sbjct 51 ATGCCGGAGGACTG--GTTCTCGATCTGCTTGATCGGCGCACCCGACTCGCGG 1 >seq7222 Length=869 Score = 120 bits (132), Expect = 1e-22 Identities = 250/368 (68%), Gaps = 16/368 (4%) Strand=Plus/Minus Query 58452 CGGATGTAGTACAGAGACTTCAGGCCCTTCTTGTGAGCGTAGATCTGCGCTCGGTTAATG 58511 ||||||||||| | | ||| | |||||| |||||||||||||| ||| ||| Sbjct 689 CGGATGTAGTAGATCGTCTTGATGCCCTTGCGCCATGCGTAGATCTGCGCCTTGTTGATG 630 Query 58512 TCTCGCGTTGTCGCTGTATCTGGGAAGAACAGCGTGAGAGACATGCCCTGGTCTACCCAA 58571 || ||||| || || || || ||||||||| || ||||||| |||||||| || Sbjct 629 TCACGCGTGGTGGCGGTGTCCTTGAAGAACAGGGTCAGAGACAGACCCTGGTCGACGTGC 570 Query 58572 GGAGATGCTACAGCGTACATATCAATGATCGGGT--TAGGTCCGATAGCGTAAGCG--CT 58627 | | || | || || | || |||| | | ||| ||||| |||| ||| || Sbjct 569 TGCGTGGCGGCCGCATAGGTGTCGATGACCTTCTCGTAG--CCGATCTCGTACGCGTCCT 512 Query 58628 ATCAATTGATTCTACATTCTCATTGGTCA----CTCCGTACTGAGGGTAATAGACTCGAC 58683 | | | || | || || || |||| | ||| ||||| ||||| |||| Sbjct 511 GGTAGT--ACTCCAGGTTGTCGTTCGTCATGAACGCCGCC----GGGTAGTAGACGCGAC 458 Query 58684 CAAGCTTACCCTCCTTGCGAACCTCAACAGGAGAGGTCACAGGGTGAATCGAGGCCGTGG 58743 | ||||| || |||||||| | ||| | || | | ||||| ||||| | ||||| Sbjct 457 CGAGCTTGCCTTCCTTGCGGATCTCGATCTTCGACGCGATCGGGTGGATCGACGACGTGG 398 Query 58744 CATGGTTAATGTACGAGATAGAGCCGGTTGGTGGGATCGCCTGGAGGTTCTGGTTGTAAA 58803 | ||| ||||||||||| || ||||| || |||| ||||| |||||||||||||| | Sbjct 397 AGTTGTTGATGTACGAGATCGACCCGGTCGGCGGGACGGCCTGCAGGTTCTGGTTGTAGA 338 Query 58804 TACCATGC 58811 | || ||| Sbjct 337 TGCCGTGC 330 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 225691185315080