Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20deminutivum_20[genbank_20GCA_5F900092275.1_202017- 01-02] 13,382 sequences; 45,801,537 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq32 205 1e-47 seq341 127 2e-24 seq915 109 7e-19 seq702 105 8e-18 seq6801 96.9 4e-15 >seq32 Length=13759 Score = 205 bits (226), Expect = 1e-47 Identities = 1125/1769 (64%), Gaps = 84/1769 (5%) Strand=Plus/Plus Query 113603 TAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATCGAGGACAACTTG 113662 |||||||| || ||||| || |||| |||||| || || | ||||| |||| | |||| Sbjct 2795 TAGTACATGCCAGTCTTAAGACCCTTCTTCCATGCGTAGAAGTGCATTGAGGTGAGCTTG 2854 Query 113663 GAGAGTGTTGGACTTTCCA-TGAAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCC 113721 | | ||||| || || | |||| ||| | || ||||||||||||||| || Sbjct 2855 GCAAA-GTTGGGCTCGGCAATAAAGACGTTGAATGACTGTGATTGATCGATGAAGGCACC 2913 Query 113722 ACGATCCGCCGCCATATCAATCACA-TCCTTCATCTTGATTTCCCACACAGTTCTGTAGA 113780 |||||| || ||||| ||||| | | | | | | ||| ||||| ||||| |||| | Sbjct 2914 ACGATCGGCAGCCATGTCAATGAGACTACGTTGACG-GATCTCCCAGACAGTCTTGTACA 2972 Query 113781 GGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGAGCCACCCGCCTTGACCA 113840 | ||| | || || ||||| | | || |||||||| |||| ||| | | Sbjct 2973 ACTCCTTCAAGTCCTCGGGGATGCCTGGTACGTTCTGGATGGAACCACGG---TTGGCGA 3029 Query 113841 TGA---GATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCCACGAGAT 113897 ||| | | |||||| || | ||| | |||| ||||||| | | | | Sbjct 3030 TGATGTGGTTCTTCATCTCTGGGGTCCACAAGCCAAGGGCCATGAGATCGGCAAGCAACT 3089 Query 113898 GCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGA-TAGATATTGGTCGTG 113956 |||| ||||| || ||||| || || | || | ||| ||||| |||| ||| Sbjct 3090 GCTTGTTGACGACGGTGAACTCTCCAGCCAACACACGACG-AGAGTAGATGTTGGAGGTG 3148 Query 113957 TATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAGGCTGTGGGCATGGGT 114016 |||||||| |||||||| ||||| || | ||| || | ||| ||||| ||||||||||| Sbjct 3149 TATGGCTCGAAGCACTCGTTGTTGCCGAGGATCTGCGAGGTTGAGGCAGTGGGCATGGGG 3208 Query 114017 GCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGGGCGTCCCAG 114076 || ||||| | | ||| |||||||| || | ||| ||||||| | |||| Sbjct 3209 GCAATGAGCAAGGAGTTGCGGAGACCGTTCTTGACGATGTTGGCCTTGAGACCAGTCCAG 3268 Query 114077 TCGTA--GTTGAGCTTTGTC-TCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGAG 114133 || | | | | | | | || ||||||| || | ||||||||||| | |||| Sbjct 3269 TCCCAACGAGGGGAGGGGACGACACCGGGCCACATGTCGTATTGGAGGATACCCTTGGAG 3328 Query 114134 GCTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCC 114193 || || ||||| || |||| || | || | | | |||| ||| | || Sbjct 3329 GCGGGTGATCCAGGGAAGCTCTCATAGGAACCTTGCTCGACAGCCATCTCGTTGGACGAG 3388 Query 114194 TCGAGGGCTGCGTGATACATTGTCTCAAAAAT-------GCGAGCA-TTCATTGCCTTGG 114245 |||||| || || || |||||| ||| ||| | | || ||| | Sbjct 3389 GTGAGGGCGGCAAAGTATATGGTCTCAGCAATCTCCTTGTTGAGGACTGCAGCGCC--AG 3446 Query 114246 CCTCGTCGGA-ATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGGACA 114304 | |||| | ||||||| || || || || ||||| ||||||||||||| Sbjct 3447 CAGAGTCGAAGGGCAAACGCAAGGCG-------ATGAAGACATCAGCGAGACCTTGGATT 3499 Query 114305 CCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCACGGGATAAAAA 114364 || | || || || || || | ||| || || ||||| ||| ||||| || | Sbjct 3500 CCAATACCGATGGGACGGTGACGCATGTTGGAGCGACGAGCCTCCTCGACGGGGTAGTAG 3559 Query 114365 TTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTC-ATGAAGCTT 114423 || | ||||| | | | || || ||| |||||| ||||| | || | ||| | Sbjct 3560 TTGCGGTCGATGATCTTGTTGAGGTTTCTGGTGATGACCTTGACCACATCGAACAAGTGT 3619 Query 114424 T-----TCGTAAT-------CAAAACTG--CGAGTCTCTTCATTGACATACTTAGGAAGG 114469 | ||| | | | | ||| | | | || ||||||||||| || ||| Sbjct 3620 TGGTGGTCGAAGTAGGCGGGCTCACCTGGTTGCTTGCCCTCCTTGACATACTTGGGCAGG 3679 Query 114470 GCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCC 114529 ||||| || |||| || || |||| ||| || |||||| | || || || Sbjct 3680 GCGATCGAGGCCAAGTTGCAAACAGCAACCTCCTCTGGTGAAGTGTATTGGATGATCTCA 3739 Query 114530 GTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACAC 114589 || ||||| || || | |||||||| | ||| | ||| || ||||| | || || Sbjct 3740 GTGCACAAGTTGGAGCATGAGATGGTGCCGAGGTTTTGTTGGTTGGACTTGGCATTGCAT 3799 Query 114590 GCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTC 114649 ||||||||||| | ||||| || || || ||||| | ||||||| || || || | Sbjct 3800 GCATCCTTGTACAAGATGTAGGGAGTACCAGTCTCGATCTGGGACTCGATGATGGCGAAC 3859 Query 114650 CAGACATC-GGCGGCTGGCACA-GTGGCGTTGGCTCGCCCCTCCT--CCTCGTACTTTGT 114705 || | ||| | | || | || | ||| || || | |||||||||| Sbjct 3860 CAAAGATCTTGAGCCTTGACCACCTTGCG-GGGAAGACCTGGGGTGGCCTCGTACTTCAA 3918 Query 114706 GTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAG-CCCTGGTGCCTTATCTGGGC 114764 ||| | | | | ||||||| || || | ||| |||| | |||| | |||| Sbjct 3919 GTACAAGTCGTTGAACTCTTGGCCGTACTTGTCAGCGAGACCCTTG-GCCTCGTTGGGGC 3977 Query 114765 AGAAGAGAGACCATTGACCACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGATCCAGA 114824 |||| | | ||| | || ||||||||||| ||||||||| ||||| ||||||| Sbjct 3978 AGAACAATGCCCACTCCTCATTGCGCTCAACACGCTCCATGAAGAGATCTGGAATCCAGA 4037 Query 114825 GAGCTGAGAAGAGATCCCGACAGCGAGCTTCT--TCATCCCCCTGATTGAGACGCAACTC 114882 | || |||| | || || ||| || ||| || | || || || || | || Sbjct 4038 GGGCATAGAACAAGTCACG--AGCACGCATCTCCTCCTTGCCGTGGTTCTTGCGGAGGTC 4095 Query 114883 CAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACG 114942 | || || | || || |||||||| || || ||||| || || | || ||||| || Sbjct 4096 GAGGAACTCAAAGACGTCGGCGTGCCATGGCTCGAGGTAGACTGCAAATGCACCCTTGCG 4155 Query 114943 ---ACGACCAGCCTGGTTTACATACCTCGCTGTGGCATTAAATACGCGAAGCATTGGAAT 114999 | ||| | |||| ||||| | || ||| | || || || || ||||| || | Sbjct 4156 CTTTCCGCCACCTTGGTCGACATAGCGGGCAGTGTCGTTGAACACACGGAGCATGGGGAC 4215 Query 115000 GATACCATCAGATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGCTCTGACATCATG 115059 | ||| | || ||| || || || || | | | || | | || || | Sbjct 4216 TAGACCGTTGGAGGTGCCGTTGGTGCCGCGGA---------TGTAGGAGCGGGCAGCACG 4266 Query 115060 GA---TGTGC------ATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGT 115110 || ||||| || ||||| || || || |||| ||||| | || || | | | Sbjct 4267 GATCTTGTGCACAGCAATGCCAATGCCTCCAGCAGACTTGGAGATGAGAGCACATTGCTT 4326 Query 115111 GAGACTGCCGTAGATCCCGTCGATCGAGTCACCCTT-ATTTGCGATAAGGAAGCAGCTCG 115169 ||| || ||||||| || ||||| ||||| |||| ||||| || ||||||||| | Sbjct 4327 GAGTGTGTCGTAGATACCCTCGATGGAGTCGTCCTTCATTTG-GACGAGGAAGCAGGAGG 4385 Query 115170 ACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATAC 115229 |||| || || || || ||||| ||||| ||||| || || || || |||| || Sbjct 4386 ACATCTGGGGATAGGGGGTGCCAGCATTGAACAGGGTGGGAGTGGCATGAGTGAA-GTAT 4444 Query 115230 CT-TGGGACATCTTATCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCG 115288 || || |||| | |||||| | | | | || |||||| || ||||| ||||| Sbjct 4445 CTCTGTGACAAGAGGTGGTAGGTGCCGATGGCAGCCTCAATGTCGTCGCCGTGGATACCA 4504 Query 115289 ATCGAGACCCGCATAAACATGTATTGGGG 115317 | || || ||||| || | || |||||| Sbjct 4505 AGGGACACACGCATCAAGAGGTGTTGGGG 4533 >seq341 Length=37664 Score = 127 bits (140), Expect = 2e-24 Identities = 287/426 (67%), Gaps = 19/426 (4%) Strand=Plus/Minus Query 10777 GGTGATCTTACGATCAAAGCGACCTGGGCGGAGGAGGGCGTCGTCAAGGATATCAATGCG 10836 |||||||| |||||| || |||||||| || |||||||| | || ||||| || | Sbjct 18856 GGTGATCTGACGATCGAAACGACCTGGACGAAGGAGGGCTTGATCGAGGATGTCGGGTCT 18797 Query 10837 GTTCGTCGCCGCGATGACAACGATGCCCGTCTC-GTTATCAAAGCCATCCATCTCAGTCA 10895 ||| || || || | ||||||| || || | | | || |||||||||||| | Sbjct 18796 GTTGGTTGCAGCAAACACAACGACATCCTTCAATGGTGTGAAT-CCATCCATCTCAACGA 18738 Query 10896 AGAGTTGATTGATGGTTTGTTCGCGTTCATCATTCGCGGGCATACCACCCGCACTG---- 10951 ||| || || | || | || || ||||| || || | | | | || | || Sbjct 18737 GGAGCTGGTTAAGTGTGTTCTCACGCTCATCGTT-GCTGCCTGAGAAGCCTCCCTTGCCA 18679 Query 10952 CGTTGCTTACCGACGGCGTCAATTTCATCGATGAAAACGATACACGGTTGATTTTCACGG 11011 || ||| | ||| ||||| |||||||| || | ||| || ||| ||| | ||| Sbjct 18678 CGGGCACGACCAATGGCATCAATCTCATCGATAAAGATGATGCAGGGTGCATTCTTGCGG 18619 Query 11012 GCAACTTCAAAGATATCTCGGACTCTCTTGGCACCGACACCCACAAACATTTCCACAAAA 11071 || ||||||| || || || | | ||| ||||| |||||||| |||||||| Sbjct 18618 GCCTGATCAAAGAGGTCACGCACACGAGCAGGACCTACACCAACAAACATCTCCACAAAG 18559 Query 11072 TTGGCGGCGGAACA-----TTG-GATGAAGGGGACGTTGGATTCACCCGCGATGGCTCGG 11125 | | |||| ||| || ||| |||||||||| ||||| ||| |||| | Sbjct 18558 T------CTGAACCACTGGTTGAGAAGAATGGGACGTTGGCCTCACCAGCGGTGGCCTTG 18505 Query 11126 GCGAGGAGGGTCTTCCCCGTCCCAGGTTTCCCTGCGAGAAGGGCACCACGTGGGATCCTG 11185 ||||| | |||||| || || || || ||| |||| | |||||||||||||||| || Sbjct 18504 GCGAGCAAGGTCTTACCAGTGCCTGGGGGACCTACGAGGATGGCACCACGTGGGATCTTG 18445 Query 11186 GCACCA 11191 |||||| Sbjct 18444 GCACCA 18439 >seq915 Length=13476 Score = 109 bits (120), Expect = 7e-19 Identities = 177/254 (70%), Gaps = 3/254 (1%) Strand=Plus/Minus Query 126046 GGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCC 126105 |||||| || ||| |||||||||||||| |||||| || || ||||| || ||| Sbjct 284 GGCAAAGTCACAGTGAAGACCCTCGTCACGACTGATGAGCTCGTTAGAGAATGTCAATCC 225 Query 126106 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGAT 126165 ||||| | || |||||||| | ||| || || | || || ||| ||| ||||| Sbjct 224 GGGCATCAAGCCACGCTTCTTGAGCCAAAAGATGGAGCAGAAGCTACCACTGAAAAAGAT 165 Query 126166 TCCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGTGTCAAA 126225 ||||| ||| || || || | | |||||||||||| || || || || || Sbjct 164 ACCCTCTACAGCTGCAAAGGCGACCAAACGCTCAGCAAATGACTTGGAGTTGGT---AAT 108 Query 126226 CCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAA 126285 ||| |||| ||||||| ||||| |||| | ||| || | ||||| ||| || | ||| Sbjct 107 CCATCTCATAGCCCACTCAGCCTTCTTCTTTACACATGGAATGGTCTCGATGGCATTAAA 48 Query 126286 GAGTTCCTTCTTTT 126299 | | |||||||| Sbjct 47 TAAATTCTTCTTTT 34 >seq702 Length=79980 Score = 105 bits (116), Expect = 8e-18 Identities = 251/374 (67%), Gaps = 4/374 (1%) Strand=Plus/Minus Query 10780 GATCTTACGATCAAAGCGACCTGGGCGGAGGAGGGCGTCGTCAAGGATATCAATGCGGTT 10839 || || ||| ||||| || || || || || | ||| || || | ||| ||||| Sbjct 62022 GACCTGACGGTCAAAACGGCCCGGACGCAGCAAGGCCGGATCGAGAACATCGGGACGGTT 61963 Query 10840 CGTCGCCGCGATGACAACGATGCCCGTCTCGTTATCAAAGCCATCCATCTCAGTCAAGAG 10899 ||||| ||||| | | || ||| | | || || ||||||||||| || || Sbjct 61962 GGTCGCAGCGATCAGGATGACGCCTTCATTGGCCTCGAAACCATCCATCTCGACCAGCAG 61903 Query 10900 TTGATTGATGGTTTGTTCGCGTTCATCATTCGCGG-GCATACCACCCGCACTGCGTTGCT 10958 || || | || ||||||||||| ||||| || || | ||| || | ||| || Sbjct 61902 CTGGTTCAGCGTCTGTTCGCGTTCGTCATTGCCGCCGCCCAG-ACCGGCGCCGCGATGAC 61844 Query 10959 TACCGACGGCGTCAATTTCATCGATGAAAACGATACACGGTTGATTTTCACGGGCAACTT 11018 ||||| || || ||||| |||||||| | ||| || ||| ||| | || || Sbjct 61843 GGCCGACCGCATCGATTTCGTCGATGAAGATGATGCAGGGTGCATTCTTCTTCGCCTGTT 61784 Query 11019 CAAAGATATCTCGGACTCTCTTGGCACCGACACCCACAAACATTTCCACAAAATTGGCGG 11078 | || || || || || | | ||||||||||| || |||||||| || || | || Sbjct 61783 CGAACATGTCACGCACACGCGATGCACCGACACCGACGAACATTTCAACGAAGTCGGAAC 61724 Query 11079 CGGAACATTG-GATGAAGGGGACGTTGGATTCACCCGCGATGGCTCGGGCGAGGAGGGTC 11137 ||| | || | || ||| || || |||| |||||| |||||||| || || || || ||| Sbjct 61723 CGG-AGATGGTGAAGAACGGCACATTGGCTTCACCGGCGATGGCGCGCGCCAGAAGCGTC 61665 Query 11138 TTCCCCGTCCCAGG 11151 || || || || || Sbjct 61664 TTACCGGTACCGGG 61651 >seq6801 Length=386 Score = 96.9 bits (106), Expect = 4e-15 Identities = 159/225 (71%), Gaps = 12/225 (5%) Strand=Plus/Plus Query 10774 CACGGTGATCTTACGATCAAAGCGACCTGGGCGGAGGAGGGCGTCGTCAAGGATATCAAT 10833 |||| ||||| ||| || |||||||| ||||| || || ||| ||| ||||| || Sbjct 134 CACGCCGATCTGACGGTCGAAGCGACCGGGGCGCAGCAGCGCGGGGTCGAGGATGTCGGG 193 Query 10834 GCGGTTCGTCGCCGCGATGACAACGATGCCCGTCTCGTT---ATCAAAGCCATCCATCTC 10890 ||||| ||||||||||| |||||| | || |||| || ||||| |||||||| Sbjct 194 ACGGTTGGTCGCCGCGAT---CACGATGACGTTCGCGTTCGGGTCGAAGCCGTCCATCTC 250 Query 10891 AGTCAAGAGTTGATTGATGGTTTGTTCGCGTTCATCATT--CG-CGGGCATACCACCCGC 10947 || | || |||| ||| || ||||| ||||| || || || ||| ||| || Sbjct 251 GACCAGCATCTGGTTGAGGGTCTGCTCGCGCTCATCGTTGCCGCCGCCCAT---ACCGGC 307 Query 10948 ACTGCGTTGCTTACCGACGGCGTCAATTTCATCGATGAAAACGAT 10992 | ||| || ||||||||||| || || |||||||| | ||| Sbjct 308 GCCGCGGTGACGGCCGACGGCGTCGATCTCGTCGATGAAGATGAT 352 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597253677676560