Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20deminutivum_20[genbank_20GCA_5F900092275.1_202017- 01-02] 13,382 sequences; 45,801,537 total letters Query= NC_010495.1 Length=45051 Score E Sequences producing significant alignments: (Bits) Value seq2271 172 2e-38 >seq2271 Length=37941 Score = 172 bits (190), Expect = 2e-38 Identities = 201/269 (75%), Gaps = 2/269 (1%) Strand=Plus/Plus Query 6642 TGACGCACAGCAAAGGATTGATGCTGCGCGCCATGATGCTGTTAATGCTGCTGCTAAGTC 6701 ||| || ||||| ||||| || |||||| |||||||| || ||||||| ||| | Sbjct 7643 TGAAGCGCAGCAGAGGATCGACCAGGCGCGCAATGATGCTCTTGATGCTGCCGCTCGCGC 7702 Query 6702 TGGCAGGTTGCAACAGCAACTCGCAAACATCCGCAAGCAGCTC-GTCGGATATTCCACCG 6760 |||| ||||||| || || |||| |||||| |||||||| | | | ||| | || Sbjct 7703 TGGCCGGTTGCAGCAACAGCTCGTTGCCATCCGTGAGCAGCTCAGGCAG-TATAACGCCA 7761 Query 6761 CTGAGTCCATTGGCAATCCAGCCGCAGAAACCGGAGTTTTGCTTGGAGACGTGCTCAGCA 6820 || || ||| |||||||||| |||||||||||||||| ||||||||||||| Sbjct 7762 CTATCGGCACTGGGGCGTCAGCCGCAGACACCGGAGTTTTGCTTGCCGACGTGCTCAGCA 7821 Query 6821 AATCTGTCGAAAGAAATCGACAACTGGCAGATTACGCTGACAGGGCAAGAGAGGCGGGAT 6880 ||||| |||| |||| |||||||||||||| ||||||||| |||| || || ||| Sbjct 7822 AATCTCTCGAGCGAAACCGACAACTGGCAGAGTACGCTGACCGGGCCGCCGAAGCCGGAC 7881 Query 6881 TAGCATGTGAGGCGCAGTACAATTCGCTG 6909 || ||||| ||||||| |||||||| Sbjct 7882 GAGTCTGTGAAAAGCAGTACGATTCGCTG 7910 Score = 87.8 bits (96), Expect = 5e-13 Identities = 57/63 (90%), Gaps = 0/63 (0%) Strand=Plus/Plus Query 43192 GATATCAAAACCCCGGCCACTGATGCTTTCCTGGCTGAAGTGCGGGCGCATGGCGTGGAG 43251 |||||| |||||||||| || || |||||||||||||||||||||||||| || |||||| Sbjct 17065 GATATCGAAACCCCGGCGACAGACGCTTTCCTGGCTGAAGTGCGGGCGCAGGGTGTGGAG 17124 Query 43252 ATG 43254 ||| Sbjct 17125 ATG 17127 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 144018710169292