Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20deminutivum_20[genbank_20GCA_5F900092275.1_202017- 01-02] 13,382 sequences; 45,801,537 total letters Query= NC_011056.1 Length=75811 Score E Sequences producing significant alignments: (Bits) Value seq132 228 4e-55 seq9105 154 7e-33 seq8692 154 7e-33 seq964 114 6e-21 >seq132 Length=332281 Score = 228 bits (252), Expect = 4e-55 Identities = 441/647 (68%), Gaps = 13/647 (2%) Strand=Plus/Minus Query 65964 CCGAGGGGCCGGGTAGTGGAGATCTACGGTCCTGAGTCTTCAGGGAAGTCAACGTTGTGC 66023 |||| ||||| | || ||||| ||||| || || || || ||| |||| || Sbjct 246290 CCGAAAGGCCGCATTGTCGAGATTTACGGGCCGGAAAGCTCGGGTAAGACAACCCTGGCG 246231 Query 66024 CTCCACGCGGTGGCCAATGCCCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCCGAA 66083 || || || | || | ||||||||| || |||| | ||||| | ||||||| ||| Sbjct 246230 CTGCATACGATTGCGGAAGCCCAGAAGAAGGGCGGCATCTGCGCCTTCGTCGACGCGGAA 246171 Query 66084 CATTCTCTCGACCCTGAGTACGCCGCGGCGCTCGGGGTGGATGTCGACAATCTCGTGGTT 66143 ||| | || ||||| | || ||| ||| || |||||| | || ||||| || | Sbjct 246170 CATGCGCTGGACCCGGTCTATGCCCGCAAGCTGGGCGTGGATCTGGAGAATCTGCTGATC 246111 Query 66144 GTGCAGCCAGACACTGGCGAGCAGGCCCTGGAGATCGTTGACCTTCTCGTCAAGTCTGGC 66203 |||||| || || ||||||||||| ||||||||| ||| || || || || Sbjct 246110 TCGCAGCCCGATACGGGCGAGCAGGCGCTGGAGATCACCGACACGCTGGTGCGTTCCGGT 246051 Query 66204 GAGGTTTCCATCATC--GTTGTGGACTCTGTGGCGGCCCTGGTGCCGCGGGCGGAGCTCG 66261 | | | | || || || || || || || || || || ||||| ||||| ||| Sbjct 246050 GCGAT--CGATGTTCTGGTGGTCGATTCCGTTGCCGCTTTGACCCCGCGTGCGGAAATCG 245993 Query 66262 AAGGGGACATCGGGGACTCGCACGTCGGCCTGCATGCCCGCCTGATGTCTCAGGCCATGC 66321 |||| || || || || || | | ||||||||| |||||||||||| ||||| ||| Sbjct 245992 AAGGCGAGATGGGCGATTCTCTCCCCGGCCTGCAGGCCCGCCTGATGAGCCAGGCGCTGC 245933 Query 66322 GCAAGCTGACCGGCACGATTGCCAGCACCAAC---ACGCTCACCCTGTGGGTGAATCAGC 66378 |||||||||||| | ||| || | ||||| | | ||| | | | || ||| Sbjct 245932 GCAAGCTGACCGCATCCATTTCCCGTTCCAACTGCATGGTCA---TTTTCATCAACCAGA 245876 Query 66379 TGCGCGAGAAGATCGGCAACGTGGGCTACGGCCCGAATGAGACCACCACCGGTGGTAAGG 66438 | ||| |||||||||| ||| | ||| || ||| ||||| || || || || | Sbjct 245875 TCCGCATGAAGATCGGC---GTGATGTTCGGTTCGCCTGAAACCACGACGGGCGGCAATG 245819 Query 66439 CTCTGCGCTTCTACGCCTCGGTGCGTATGGATGTCCGCAGGATCGCCACCGAGAAGGAAG 66498 | ||| ||||| || ||||||||| | ||| ||||| | |||| | ||||||| Sbjct 245818 CGCTGAAATTCTATGCTTCGGTGCGTCTCGATATCCGCCGCATCGGTGCGCTGAAGGAAC 245759 Query 66499 GCGATGAGGCTGTCGGCAACCGCACGCGCGTGAAGGTTGTCAAGAACAAGCTGGCGCCTC 66558 | || |||| |||||||||| || ||||| ||||| |||||||||||||| ||||| | Sbjct 245758 GTGACGAGGTGGTCGGCAACCAGACCCGCGTCAAGGTGGTCAAGAACAAGCTTGCGCCCC 245699 Query 66559 CGCACCGCCAGGCTGAGTTTTCCATCGTCTACGGCGAGGGCATTTCC 66605 | | |||| || || |||| | || ||||| ||| ||||| Sbjct 245698 CCTTCAAGCAGGTCGAATTCGACATCATGTATGGCGAAGGCGTTTCC 245652 >seq9105 Length=354 Score = 154 bits (170), Expect = 7e-33 Identities = 186/249 (75%), Gaps = 7/249 (3%) Strand=Plus/Minus Query 66214 TCATCGTTGTGGACTCTGTGGCGGCCCTGGTGCCGCGGGCGGAGCTCGAAGGGGACATCG 66273 ||||||| | ||||| |||||||| || ||||| || || ||| |||| || || || | Sbjct 246 TCATCGTCATTGACTCCGTGGCGGCGCTCGTGCCCCGCGCCGAGATCGAGGGCGAGATGG 187 Query 66274 GGGACTCGCACGTCGGCCTGCATGCCCGCCTGATGTCTCAGGCCATGCGCAAGCTGACCG 66333 | |||||||||||||| ||||| || || || ||||| ||||| |||| ||||| |||| Sbjct 186 GCGACTCGCACGTCGGTCTGCAGGCGCGACTCATGTCGCAGGCGCTGCGTAAGCTCACCG 127 Query 66334 GCACGATTG--CCAGCACCAACACGCTCACCCTGTGGGTGAATCAGCTGCGCGAGAAGAT 66391 | | || |||| ||||||||| | | | | || ||||| ||||||||||| Sbjct 126 G-TGGCCTGAACCAG-ACCAACACGACGATGATCTTCATCAACCAGCTTCGCGAGAAGAT 69 Query 66392 CGGCAACGTGGGCTACGGCCCGAATGAGACCACCACCGGTGGTAAGGCTCTGCGCTTCTA 66451 ||| ||| || |||| || ||||| ||| ||||||||||||| ||| ||||| Sbjct 68 CGG---CGTCTTCTTCGGCTCGCCCGAGACGACCGCCGGTGGTAAGGCGCTGAAGTTCTA 12 Query 66452 CGCCTCGGT 66460 ||||||||| Sbjct 11 CGCCTCGGT 3 >seq8692 Length=1388 Score = 154 bits (170), Expect = 7e-33 Identities = 284/414 (69%), Gaps = 2/414 (0%) Strand=Plus/Plus Query 65912 CATTCCCACCGGCTCGATAGCTCTGGACGCCGCTCTCGGCATCGGGGGGTATCCGAGGGG 65971 ||| |||||||| ||| | ||||| ||| |||||||| || || || | ||| Sbjct 976 CATCCCCACCGGTTCGCTGATGCTGGATATCGCACTCGGCATTGGTGGACTGCCCAAGGG 1035 Query 65972 CCGGGTAGTGGAGATCTACGGTCCTGAGTCTTCAGGGAAGTCAACGTTGTGCCTCCACGC 66031 || || || || ||||||||||| || || || || ||| | || || ||| || || Sbjct 1036 GCGTGTCGTTGAAATCTACGGTCCGGAATCCTCGGGCAAGACCACCCTGACCCTGCAGGC 1095 Query 66032 GGTGGCC-AATGCCCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCCGAACATTCTC 66090 | ||| |||| ||||||| || |||| ||| |||| |||||||||||| ||| | | Sbjct 1096 CATTGCCGAATG-CCAGAAGAAGGGCGGCACCGCTGCCTTCATCGACGCCGAGCATGCAC 1154 Query 66091 TCGACCCTGAGTACGCCGCGGCGCTCGGGGTGGATGTCGACAATCTCGTGGTTGTGCAGC 66150 | ||||| |||||||| ||| || ||| | || ||| | || || | ||||| Sbjct 1155 TGGACCCGATCTACGCCGCCAAGCTGGGCGTGAACGTGGACGACCTGCTGCTGTCGCAGC 1214 Query 66151 CAGACACTGGCGAGCAGGCCCTGGAGATCGTTGACCTTCTCGTCAAGTCTGGCGAGGTTT 66210 | || || || |||||||| ||||| |||| ||| | || || ||| || ||| Sbjct 1215 CCGATACCGGTGAGCAGGCGCTGGAAATCGCCGACATGCTGGTGCGGTCCAGCTCGGTGG 1274 Query 66211 CCATCATCGTTGTGGACTCTGTGGCGGCCCTGGTGCCGCGGGCGGAGCTCGAAGGGGACA 66270 ||| | || || ||||| || || || ||| || ||| || ||||||| || | Sbjct 1275 ACATTGTGGTGGTCGACTCGGTCGCCGCGCTGACCCCCAAGGCCGAAATCGAAGGCGAAA 1334 Query 66271 TCGGGGACTCGCACGTCGGCCTGCATGCCCGCCTGATGTCTCAGGCCATGCGCA 66324 | || ||| || |||||||| ||||| |||||| ||||| |||||| Sbjct 1335 TGGGCGACCAGCTGCCGGGCCTGCAGGCCCGTCTGATGAGCCAGGCGCTGCGCA 1388 >seq964 Length=324 Score = 114 bits (126), Expect = 6e-21 Identities = 125/166 (75%), Gaps = 0/166 (0%) Strand=Plus/Plus Query 66447 TTCTACGCCTCGGTGCGTATGGATGTCCGCAGGATCGCCACCGAGAAGGAAGGCGATGAG 66506 |||||||||||||| || ||||| |||| | |||| ||| ||||| || || Sbjct 5 TTCTACGCCTCGGTCCGCATGGACATCCGTCGTATCGAGACCCTCAAGGACGGAACCGAC 64 Query 66507 GCTGTCGGCAACCGCACGCGCGTGAAGGTTGTCAAGAACAAGCTGGCGCCTCCGCACCGC 66566 || ||||| |||||||| | || ||||| |||||||||||| ||||||| ||| | Sbjct 65 GCCGTCGGAAACCGCACCAGGGTCAAGGTGGTCAAGAACAAGATGGCGCCGCCGTTCAAG 124 Query 66567 CAGGCTGAGTTTTCCATCGTCTACGGCGAGGGCATTTCCCGCGAGG 66612 ||||| ||||| |||| ||||||||| ||||| ||||| |||| Sbjct 125 CAGGCCGAGTTCGACATCCTCTACGGCGTCGGCATCTCCCGTGAGG 170 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 242430854744744