Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20deminutivum_20[genbank_20GCA_5F900092275.1_202017- 01-02] 13,382 sequences; 45,801,537 total letters Query= NC_011103.1 Length=60195 Score E Sequences producing significant alignments: (Bits) Value seq104 98.7 4e-16 >seq104 Length=924147 Score = 98.7 bits (108), Expect = 4e-16 Identities = 194/279 (70%), Gaps = 10/279 (4%) Strand=Plus/Minus Query 43304 TTGTTCTCACCAGCAAGCTGATCGACGGCACTTTCCCTGACTATCAGCGCGTCATCCCCA 43363 ||||||| ||| ||||||||| |||||||| ||||| ||||||||||||||||| || Sbjct 225316 TTGTTCTGACCTCCAAGCTGATTGACGGCACCTTCCCGGACTATCAGCGCGTCATTCCAT 225257 Query 43364 CCCAGAACGACAAGAAGATCGTCTTCGGCAGCGATGACATGCGCCAGGCAGCC-TCG--C 43420 || ||||||||||| | | ||| | || | || | ||| | | ||| | | | Sbjct 225256 CCGGCAACGACAAGAAACTGACCATCGACCGCCA-GAGCTTCGC--GTCTGCCGTTGACC 225200 Query 43421 GCGTCTCTGTGATCTCGTCTGAGCGTGGCCGCGCGGTGAAGTTATCCTTCGCGGAGGGGG 43480 ||||||| ||| ||| ||||||||||| || || ||| | | | || || || Sbjct 225199 GCGTCTCGACGATTTCGAGCGAGCGTGGCCGTGCCGTCAAGCTGACGATTGCCGATGGCC 225140 Query 43481 AAGCGAAGCTGGCCGTGAGCAGTCCGGAAACCGGAAGCGCCACCGACGAAATCTTCG--T 43538 | || || | || | || |||||| | || |||||||| ||||| | | || | Sbjct 225139 AGCTGACATTGACGGTCAACAATCCGGATTCGGGCAGCGCCACGGACGAGCT-TGCGGCT 225081 Query 43539 GAACTACGATGGCGACCCGATCGATATCGGATTCAACGC 43577 | | || || ||| |||||||| ||||| ||||| || Sbjct 225080 G-ATTATGACTCCGATCCGATCGAGATCGGCTTCAATGC 225043 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 192471809202988