Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20deminutivum_20[genbank_20GCA_5F900092275.1_202017- 01-02] 13,382 sequences; 45,801,537 total letters Query= NC_011216.1 Length=37635 Score E Sequences producing significant alignments: (Bits) Value seq3078 86.0 2e-12 >seq3078 Length=957 Score = 86.0 bits (94), Expect = 2e-12 Identities = 189/278 (68%), Gaps = 14/278 (5%) Strand=Plus/Minus Query 15460 ATGAACAAGTCGCAACTCATCGACGCCGTGGCGAAGAACGCCGAGCTGACGAAGGCCCAG 15519 ||||||||| | || | ||||||||||| || || |||||| ||||| |||||| || Sbjct 388 ATGAACAAGACCGAATTGATCGACGCCGTTGCCGAGGCCGCCGACCTGACCAAGGCCGAG 329 Query 15520 GCGGCTCAATCCGTCGAAGCCGTGCTGAACGCGATCCAGCTC----GGCCTGCAGGAAGA 15575 | | ||||||| |||| | | ||| |||| | | | |||| ||| | Sbjct 328 TCCAACCGCGCCGTCGATGCCG---TCATCGC-TTCCATCACCAAGGCCCTGAAGGGCGG 273 Query 15576 CGGCGACGTGGCGCTGTCGGGCTTCGGCACCTTTGCCGTGGCAGCGCGCAAAGCACGCAC 15635 | || ||| ||||| ||||||||| || || || ||||| || ||||| Sbjct 272 TGACGCTGTGACGCTGGTGGGCTTCGGTACGTTCCAGGTTCGCGCGCGTGCTGCCCGCAC 213 Query 15636 CGGCCGCAATCCGGCGACGGGCGAATCGATCCAGATCGCCG---CCAGCAAGGCCGTGAA 15692 ||||||||| ||| ||| ||||| | ||| ||||||| | | | ||| |||| Sbjct 212 CGGCCGCAACCCGAAGACCGGCGACACCATCAAGATCGCTGCATCGAACAA-TCCGT--C 156 Query 15693 ATTCAAGCCCGGCAAGGCACTGAAAGACGCCGTGAACT 15730 |||||| | ||||| || ||||| || ||||| |||| Sbjct 155 GTTCAAGGCTGGCAAAGCCCTGAAGGATGCCGTAAACT 118 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 120291281323948