Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20deminutivum_20[genbank_20GCA_5F900092275.1_202017- 01-02] 13,382 sequences; 45,801,537 total letters Query= NC_011222.1 Length=44929 Score E Sequences producing significant alignments: (Bits) Value seq93 113 1e-20 seq1310 100 8e-17 >seq93 Length=584700 Score = 113 bits (124), Expect = 1e-20 Identities = 213/310 (69%), Gaps = 4/310 (1%) Strand=Plus/Minus Query 20260 TACCAAAGAAGCGCAGACCTATTTTTAGGCGTTCCTTTCAATATTGCATCTTATTC--TA 20317 ||||||||||| || || |||||||||| |||||||| |||||||| |||||| | || Sbjct 272415 TACCAAAGAAGTGCCGATATATTTTTAGGAGTTCCTTTTAATATTGCTTCTTATGCCTTA 272356 Query 20318 TCTTGCTGTCTATGGCTGCACAGGTTTGCGGTTTAAAGCCTCGTAGATTCATTCATACGA 20377 | || || | ||| ||| |||||||||| |||| |||| || ||| ||||| || Sbjct 272355 T-TTACTAT-GATGATTGCTCAGGTTTGCGATTTAGAGCCGGGTGAATTTATTCACACTT 272298 Query 20378 TCGGTGACGGACATATATATTTGAATCACGTTGAGCAGGTGAAAGAACAATTGAGTAGAG 20437 | || |||| ||| || || ||||| |||| ||| | || ||||| | | | Sbjct 272297 TTGGCGACGCACACATTTACAACAATCATTTTGAACAGTTAGAACTGCAATTAACGCGTG 272238 Query 20438 AGCCGTTTGCCCTTCCAAAATTGGAGCTAAACCCAAATGTTCGTAATATATTCGATTTTA 20497 | || | | |||||| || | || || | || || || || |||||| Sbjct 272237 AACCAAAACCATTACCAAAAATGATTTTGAATCCTGAGATTAAAAACATTTTTGATTTTG 272178 Query 20498 AGTATGAAGATATTAAAATAGTAGATTATAACTGCCATCCGGCTATAAAGGGGGATGTTG 20557 | ||||||||| ||| | |||||||| | ||||| |||||||| || ||||| Sbjct 272177 ATTATGAAGATTTTACTCTCGTAGATTACGATCCGCATCCAGCTATAAAAGGAAGTGTTG 272118 Query 20558 CGGTATGAAT 20567 | |||| ||| Sbjct 272117 CTGTATAAAT 272108 >seq1310 Length=146132 Score = 100 bits (110), Expect = 8e-17 Identities = 158/222 (71%), Gaps = 11/222 (5%) Strand=Plus/Plus Query 20131 AACCCGGAGTCAAGAAGGCTAATTGTTAGTGCTTGGAATGTTGGAGAAATACA-CATGAT 20189 || || || || |||||| | ||||| ||| |||||||| | ||| ||| | ||| || Sbjct 105064 AATCCCGATTCCAGAAGGATTATTGTGTCTGCCTGGAATGTGGCAGAGATAGAACAT-AT 105122 Query 20190 GGCACTTCCTCCGTGCCACTGCTTTTTTCAGTTCTATGTGTCTGAGTCCGGTTATTTGGA 20249 ||||||||| || ||||| |||||| ||||| ||||| |||| ||| | || Sbjct 105123 GGCACTTCCACCCTGCCATGCCTTTTTCCAGTTTTATGTAGCTGA---CGGAAAACTGAG 105179 Query 20250 CTTGAAACTGTACCAAAGAAGCGCAGACCTATTTTTAGGCGTTCCTTTCAATATTGCATC 20309 || | || || || |||| ||||| | ||| | || || ||||| || ||||| || Sbjct 105180 CTGTCAGCTTTATCAGCGAAGTGCAGATATTTTTCTGGGGGTACCTTTTAACATTGCCTC 105239 Query 20310 TTATTCTATCTTGCTGTCT---ATGGCTGCACAGGTTTGCGG 20348 ||| | ||| ||| || |||| ||||||||||||||| Sbjct 105240 CTATGC---CTTACTGACTATGATGGTTGCACAGGTTTGCGG 105278 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 143628372208244