Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20deminutivum_20[genbank_20GCA_5F900092275.1_202017- 01-02] 13,382 sequences; 45,801,537 total letters Query= NC_011273.1 Length=164602 Score E Sequences producing significant alignments: (Bits) Value seq4593 437 9e-118 seq4311 199 4e-46 >seq4593 Length=590 Score = 437 bits (484), Expect = 9e-118 Identities = 377/464 (81%), Gaps = 2/464 (0%) Strand=Plus/Plus Query 156411 CTACCTGCCGATGTTCTGGTCGTCGCGAGGC-AAGCTCACCAACACCGCCGACATGATCC 156469 |||||||||||| | ||||| ||| |||| ||||| || ||||| |||||| |||||| Sbjct 1 CTACCTGCCGATCTATTGGTCCTCG-AAGGCGAAGCTGACGAACACGGCCGACCTGATCC 59 Query 156470 GGCTCATCATCCGGGACGAGGCCGTGCACGGCTACTACATCGGCTACAAGTTCCAGAAGG 156529 | ||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 60 GCCTCATCATCCGCGACGAGGCCGTGCACGGGTACTACATCGGCTACAAGTTCCAGAAGG 119 Query 156530 GCCTGGAGAAGGAGACCAAGGCCCGCCAGCAGGAACTCAAGGACTACACCTATGAGCTGC 156589 |||| ||||| |||||| ||| |||| | || |||||||||||||| | ||| Sbjct 120 GCCTCGAGAACGAGACCCAGGAGCGCCGCGATGAGCTCAAGGACTACACGTTCTCGCTCA 179 Query 156590 TGTTCGAGCTGTTCGACAACGAGCAGGAGTACACCCAGGACCTCTACGACGCCACCGGCC 156649 ||| |||||| | |||||||||| | ||||||| |||||||||||||||| ||| | Sbjct 180 TGTACGAGCTCTACGACAACGAGGTGCAGTACACGCAGGACCTCTACGACGGTGTCGGTC 239 Query 156650 AGACCGAGGACGTGAAGAAGTTCCTGCGGTACAACGGCAACAAGGCCCTGCAGAACCTGG 156709 |||||| ||||||||||||||||||| ||||||| |||||||||||| |||||||| Sbjct 240 TGACCGAAGACGTGAAGAAGTTCCTGCACTACAACGCCAACAAGGCCCTCATGAACCTGG 299 Query 156710 GCTACGACGCGCTGTTCAGCCGCAGCGACTGCGACGTCAACCCGGCCATCCTGAGCGCGC 156769 ||||||| ||| ||||| | ||||| | |||| |||||||| |||||| || | Sbjct 300 GCTACGAGGCGATGTTCCCCTCCAGCGTCACGAACGTGAACCCGGCGATCCTGTCGGCAC 359 Query 156770 TGTCGCCCGGTGGAGACGAGAACCACGACTTCTTCTCGGGGTCGGGCAGCACGTACGTCA 156829 | ||||| | ||||||||||||||||||||||||||||| ||| ||||||||| Sbjct 360 TCTCGCCGAACGCCGACGAGAACCACGACTTCTTCTCGGGGTCAGGCTCGTCGTACGTCA 419 Query 156830 TGGCCAAGGGTGTGGTCACCGAAGACGACGACTGGGACTTCTGA 156873 | | ||||| | || ||| |||||||||||||||||||||||| Sbjct 420 TCGGCAAGGCCGAGGCCACGGAAGACGACGACTGGGACTTCTGA 463 >seq4311 Length=1197 Score = 199 bits (220), Expect = 4e-46 Identities = 188/240 (78%), Gaps = 0/240 (0%) Strand=Plus/Minus Query 152885 CATCTTCGAGAGATTCACCGACCGCGCCCGTCGCGTCTGCGTCCTCGCCCAAGAGGAAGC 152944 ||| |||||||||||||| ||||| |||||||| || ||||||||||||||| || || Sbjct 240 CATGTTCGAGAGATTCACGGACCGAGCCCGTCGAGTGGTCGTCCTCGCCCAAGAAGAGGC 181 Query 152945 GCGCATGCTCAACCATGCGTACATCGGCACCGAGCATCTGCTGCTCGGGCTGGTCCACGA 153004 | ||||||||||| |||||||| |||||||| | |||||||| || ||||||| Sbjct 180 GAAGATGCTCAACCACAACTACATCGGGACCGAGCACATCCTGCTCGGCCTCATCCACGA 121 Query 153005 GGGCGAGGGCGTAGCCGCCAAGGCGCTGCAGGCGCTCGACATCAACCTGGAGGAGGTGCG 153064 ||| || ||||| ||||||||||| || || |||| |||| ||| || | ||||| Sbjct 120 GGGTGAAGGCGTCGCCGCCAAGGCCCTCGAGAGCCTCGGCATCTCCCTCGACGCCGTGCG 61 Query 153065 TGCCGAGGTCGAGGAGATCATCGGCCACGGCCAGCAGGCACCCACCGGGCACATCCCGTT 153124 | |||| |||| ||||||||||| || |||||| || ||||||||||||||||| Sbjct 60 CGAGCAGGTGCAGGACATCATCGGCCAGGGTCAGCAGCAGCCGACCGGGCACATCCCGTT 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 526510313252640