Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20deminutivum_20[genbank_20GCA_5F900092275.1_202017- 01-02] 13,382 sequences; 45,801,537 total letters Query= NC_013059.1 Length=40975 Score E Sequences producing significant alignments: (Bits) Value seq3951 179 1e-40 seq2342 87.8 5e-13 >seq3951 Length=514 Score = 179 bits (198), Expect = 1e-40 Identities = 110/117 (94%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 38418 ATGAGCAGAGTAACCGCGATTATCTCCGCTCTGGTTATCTGCATCATCGTCTGCCTGTCA 38477 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 352 ATGAACAGAGTAACCGCGATTATCTCCGCTCTGGTTATCTGCATCATCGTCTGCCTGTCA 411 Query 38478 TGGGCTGTTAATCATTACCGTGATAACGCCACCGCCTACAAAGAGCAGCGCGATAAA 38534 ||||||||||||||||||||||||||||||| ||||||||| |||||||| ||| Sbjct 412 TGGGCTGTTAATCATTACCGTGATAACGCCATTACCTACAAAGCCCAGCGCGACAAA 468 >seq2342 Length=4104 Score = 87.8 bits (96), Expect = 5e-13 Identities = 59/66 (89%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 21092 CATTTCTTGTCTCCATAAAACAAAACTCGCCGTAGCGAGTTCAGATAAAAGAAAACCTCG 21151 ||||| | ||||||||||||||||| ||||||||||||||||||||||||||| ||||| Sbjct 1969 CATTTATCATCTCCATAAAACAAAACCCGCCGTAGCGAGTTCAGATAAAAGAAATCCTCG 2028 Query 21152 ACTGTG 21157 | ||| Sbjct 2029 TCAGTG 2034 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 130977582880508