Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20deminutivum_20[genbank_20GCA_5F900092275.1_202017- 01-02] 13,382 sequences; 45,801,537 total letters Query= NC_014636.1 Length=225268 Score E Sequences producing significant alignments: (Bits) Value seq11148 91.5 2e-13 seq873 86.0 9e-12 >seq11148 Length=484 Score = 91.5 bits (100), Expect = 2e-13 Identities = 68/80 (85%), Gaps = 0/80 (0%) Strand=Plus/Minus Query 191862 TGGTGCGCCGTGATGGACTCGAACCATCGACCCTCGGATTAAAAGTCCGATGCTCTACCA 191921 ||||| ||||||||||| |||||||||||||| ||||||||||| |||||||||| Sbjct 263 TGGTGGGCCGTGATGGATTCGAACCATCGACCAAAAGATTAAAAGTCTTCTGCTCTACCA 204 Query 191922 ACTAAGCTAACGGCGCGTTG 191941 ||| |||||||||| | ||| Sbjct 203 ACTGAGCTAACGGCCCATTG 184 >seq873 Length=95130 Score = 86.0 bits (94), Expect = 9e-12 Identities = 70/84 (83%), Gaps = 1/84 (1%) Strand=Plus/Plus Query 189963 TGGTGCGGATGGTCGGACTCGAACCGACACGCCTATGGCGCTAGAACCTAAATCTAGTGC 190022 |||||||||| | ||||||||||| |||| | | ||| ||||||||||||| |||| Sbjct 5176 TGGTGCGGATAGAGGGACTCGAACCCCCACGG-TCTCCCGCCAGAACCTAAATCTGGTGC 5234 Query 190023 GTCTGCCAATTTCGCCACATCCGC 190046 |||| |||||||||||| |||||| Sbjct 5235 GTCTACCAATTTCGCCATATCCGC 5258 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 720609039956160