Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20deminutivum_20[genbank_20GCA_5F900092275.1_202017- 01-02] 13,382 sequences; 45,801,537 total letters Query= NC_015265.1 Length=37236 Score E Sequences producing significant alignments: (Bits) Value seq12163 214 4e-51 seq12249 201 3e-47 seq3418 190 5e-44 seq9435 152 1e-32 seq3006 147 5e-31 seq1269 140 8e-29 seq2422 96.9 8e-16 seq3688 93.3 1e-14 >seq12163 Length=619 Score = 214 bits (236), Expect = 4e-51 Identities = 441/648 (68%), Gaps = 44/648 (7%) Strand=Plus/Minus Query 32572 CAGAGCTACCACGGCAACCTGTATTTCGACGAGTACTTCTGGGTGCCGCGCTTCCAGGAG 32631 ||| |||||||||| || | || |||||||| | ||||||| ||||| | || Sbjct 619 CAGGGCTACCACGGGAATTTCTACTTCGACGAATTCTTCTGGACCTACGGCTTCAACCAG 560 Query 32632 CTGCGCAAGGTCGCCTCCGGCATGGCGATTCACGACCAGTGGCGGCAGACGTATTTCTCG 32691 ||| |||||||||| |||||||||||| ||| | | ||||| |||| || ||| Sbjct 559 CTGAACAAGGTCGCCAGCGGCATGGCGATGCACAAGAAATGGCGCAAGACCTACTTCAGC 500 Query 32692 ACGCCGTCGAGCCTCGCGCACGACGCTTATCCGTTCTGGTCGGGCAAGCTGTTCAACCGT 32751 ||||| || | | | |||||||| || || |||||| | ||| ||| |||||| Sbjct 499 ACGCCTTCCACCATGGCGCACGAAGCCTACGATTTCTGGACAGGCGAGCGCTTCAACAAG 440 Query 32752 GGCCGACCGAAAGATCAGCACGTATCGATCGACATTTCGCACGCGGC--GCTGGCCGCGG 32809 ||| |||| ||||| ||||||||||| | || | |||| ||||| | | Sbjct 439 GGCAAGCCGACCTCCCAGCAGGTATCGATCGA--TGTCAGCCACGGCCGGCTGGGCAGTG 382 Query 32810 GCCGTTCGTGTCAGGACGGCCAGTGGCGCCAGATCGTCACGGTCGAGGACGCCGTGCGCG 32869 |||| || |||||| ||||| ||||||||||| || ||||| | Sbjct 381 GCCGACGCTGCGAGGACGCTATCTGGCGGCAGATCGTCACAGTGCTCGACGC-------G 329 Query 32870 GCGGTTGCAACAGCGGGGCGCGGCCGCTCTTCAATCTCGACCGGCTACGACTGGAATACA 32929 || | || | ||| ||| | | ||| || | | ||| Sbjct 328 GCCG-----ACCGAGGGT-GCGATC--TGTTCGATGTGGNN----------------ACA 293 Query 32930 GCCCCGAGGAATACGCGAACCTGCTGCTGTGCCAGTTCATCGACGATT-CGCTGTCGGTT 32988 || ||||||||| ||| ||||||||| ||||| ||||| | ||||| ||| || | Sbjct 292 GCGCCGAGGAATTCGCCAACCTGCTGATGTGCGAGTTCGTGGACGACAGCGCCAGCG-TG 234 Query 32989 TTCCCGCTGACGGTGTTGCAGCCGTGCATGGTCGATACCTGGGAGGTGTGGGACGAC--- 33045 |||||||||||| || ||||||||||| ||| || | ||||| || ||||| || | Sbjct 233 TTCCCGCTGACGATGCTGCAGCCGTGCCAGGTGGACAGCTGGGTGGAGTGGGCCGGCGAG 174 Query 33046 TTCAAGCCACTGTACC-TGCGCCCGTTCGGCGACGAGGAGGTCTGGATCGGCTACGACCC 33104 |||| ||| || || ||||||| | |||||| | ||| ||||| || |||||||| Sbjct 173 TTCA-GCCCCTTCGCCATGCGCCCATATGGCGACCGCGCGGTGTGGATTGGGTACGACCC 115 Query 33105 GTCGCATACGGGCGACAGCGCCGGCTGCGTGGTGATTGCGCCGCCG-AAGCGTCCGGGCG 33163 | | | |||||||||||||||||| |||| | | |||||||| ||| | |||| | Sbjct 114 GGCCGAGACGGGCGACAGCGCCGGCATCGTGATTGTGGCGCCGCCCCAAGTGCCCGGT-G 56 Query 33164 GGAAGTTCCGCGTGCTCGAGCGGTTCCAGTGGCACGGTTTGGACTTCG 33211 | |||||||||||||| ||||| ||||| | || ||||||||| Sbjct 55 GCAAGTTCCGCGTGCTGGAGCGTCACCAGTTCAAGGGCATGGACTTCG 8 >seq12249 Length=751 Score = 201 bits (222), Expect = 3e-47 Identities = 217/284 (76%), Gaps = 5/284 (2%) Strand=Plus/Plus Query 26161 CTGCAGCGCGATCAGCTGCTCGGCGTTTTCGTGGCAGGTGGTGTAGTTGCCGGCGACGGT 26220 |||||| || ||| ||| || || | ||||| ||||| ||||||| |||||| ||| Sbjct 268 CTGCAGGCCGGTCACCTGGGCGACGGTGGCGTGGTGGGTGGCGTAGTTGTCGGCGAGGGT 327 Query 26221 TGCGGCGACGGCAGAGAGCGTAACGCCCGCGGCGGCCGCATCAGCGCTTCCGGGATCGCC 26280 | ||||||||||||||||||||||||| ||||||| |||||||| ||||| | | || Sbjct 328 TTCGGCGACGGCAGAGAGCGTAACGCCGGCGGCGGGCGCATCAGGATCTCCGGCAGCTCC 387 Query 26281 CACCGGCACGTTGGCG---GCTGCTGCGTCGTGCACGCGCACAAAGCCGACAGGAACAAC 26337 | | ||| | || ||||| |||||||| | |||||| ||||| ||||| ||| Sbjct 388 GGCGAGGGCGTCGCCGCTCGCTGCGGCGTCGTGGAGGCGCACGAAGCCAACAGGCACAGT 447 Query 26338 GCAGGCACGATCCGC-TTCGCGGTCCACATAAACCGGAACCTCCTTGACGATGGTGTCGC 26396 ||||||| ||| || ||||| || ||||| || |||||||| |||||||| ||| || Sbjct 448 GCAGGCAGCATCAGCATTCGCAGT-GACATAGACGGGAACCTCTTTGACGATAGTGGTGC 506 Query 26397 CCTTCTCGCGGACGACCTGGACACGATCAACGTACTGCGTGACG 26440 | ||| ||||| ||||| |||||||| ||||||| || ||| Sbjct 507 CGCGCTCACGGACCACCTGCACACGATCCACGTACTCGGTCACG 550 >seq3418 Length=506 Score = 190 bits (210), Expect = 5e-44 Identities = 268/373 (72%), Gaps = 4/373 (1%) Strand=Plus/Plus Query 34150 ACCAGGAGATTTACGGGCTGCCCGAATACCTGTCGGCGCTGAACTCGACCTGGTTGAACG 34209 |||||||| | ||||| |||||||| | || |||| || | | | | | |||| Sbjct 127 ACCAGGAGGTGTACGGCCTGCCCGAGTGGATGCCGGCCGTGCAGGCCGCGCTGCTCAACG 186 Query 34210 AGAGCGCGACGCTGTTTCGTCGGCGCTATTACAAGAACGGCAGCCATGCGGGCTTCATCC 34269 || || |||||||| || || || ||||| |||||| || || |||||||||| Sbjct 187 AGTCGGCCACGCTGTTCCGGCGCAAGTACTACAACAACGGCTCGCACGCCGGCTTCATCC 246 Query 34270 TGTACATGACCGA--CCCGGCCGACAAGCAGGAGGACGTCGACAACCTGCGCGCGGCGCT 34327 | ||| ||||||| ||| | || || | | ||||| | |||||||| |||||| Sbjct 247 TCTACCTGACCGATTCCCAGGCGG-AATC-GTCCGACGTAACCGGCCTGCGCGAGGCGCT 304 Query 34328 GAAGAACGCGAAGGGGCCGGGCAACTTCCGGAACCTGTTCATGTACGCGCCGAAGGGCAA 34387 ||| || || |||||||||||||||||||||||| || | |||| || ||||| Sbjct 305 CAAGGCGGCACGTGGTCCGGGCAACTTCCGGAACCTGTTCGTGCATTCGCCCAACGGCAA 364 Query 34388 GAAGGACGGGATCCAGCTGCTGCCGATCGGCGAGGTGGCGGCGAAGGACGAGTTCTGGAA 34447 ||| ||||| | ||| | | ||| | ||||||||||||| ||||| |||||| || Sbjct 365 GAAAGACGGTCTGCAGATCATCCCGGTGAGCGAGGTGGCGGCCAAGGATGAGTTCGCCAA 424 Query 34448 CATCAAGAAGGTGACGGTCGAGGATCAGCTCGCGGCGCACCGCGTGCCGCCGCAGTTGAT 34507 ||||||| |||||| ||| || ||| ||||||| ||||||||||||||| || | Sbjct 425 CATCAAGGGCGTGACGCGCGACGACATGCTGGCGGCGCTGCGCGTGCCGCCGCAGCTGCT 484 Query 34508 GGGGATCATCCCG 34520 || ||| | ||| Sbjct 485 TGGCATCGTGCCG 497 >seq9435 Length=520 Score = 152 bits (168), Expect = 1e-32 Identities = 252/361 (70%), Gaps = 2/361 (1%) Strand=Plus/Minus Query 29872 GATGTCCTCGACCACGCAGCCCGCGCCGAATTCCTCGATCACGTACGCATCGTTCGAGCT 29931 ||||| |||||||| | ||| |||| | || |||| |||||| | ||||| || Sbjct 490 GATGTTCTCGACCAGGGCGCCACGGCCGTAGTCTTCGACCACGTAGTCGTCGTTGGACGA 431 Query 29932 TTCGAAGTTCTCGATGCGATCGCGCTTCGGGTTGTCGATGAGCGCGCGACGGCGCGCACC 29991 ||||||||| | | ||| | || ||| | |||||||| || ||||| | | Sbjct 430 CTCGAAGTTCGCCACGCGGTTCTTCTGCGGCTGCTCGATGAGGTAACGGCGGCGGCCGTC 371 Query 29992 GATTTGCCAGTACAGCGACAGGTTGTCCAGGCGCGTGATCATCAGCGCGCGCGGGGGGAA 30051 ||| |||||||| | |||||| |||||||| |||| |||||| ||| | |||| Sbjct 370 GATCTGCCAGTAGATCGACAGATTGTCCAGCGAGGTGACCATCAGGGCGTTGGCCGGGAC 311 Query 30052 GTACGGCACGCGCACGGCCGGCAGATTGCCGATGCGCTT-CTGCGCCGTGATGACGTCCG 30110 | | |||||| ||| | | |||| ||||||||||| ||| || | | |||| Sbjct 310 GAAAGGCACGATCACCGGCTGCAGGCCACCGATGCGCTTAGTGC-CCAGCACCAGATCCG 252 Query 30111 CGGCGAGCGCTTCGGTCGGCGGCTGATCCTTGTTCACGACCGGGAAATACTTGTCCTGCA 30170 |||| ||| |||||||||| | | |||||||| | || ||||| |||||||| |||| Sbjct 251 CGGCCAGCTGCTCGGTCGGCGCCAGGTCCTTGTTGATGATGGGGAAGTACTTGTCGTGCA 192 Query 30171 GCAGCTCGCGGCCGCAGATCACGACGAGATTCGGATCCTCGACGTACCACGGCTCGAGCA 30230 ||| | |||||| ||| || || | |||||||| || ||||||||||| || Sbjct 191 CCAGGTTGCGGCCCAGGATGACCACCAAGCCCGGATCCTGCTGGTGCCACGGCTCGATCA 132 Query 30231 G 30231 | Sbjct 131 G 131 >seq3006 Length=629 Score = 147 bits (162), Expect = 5e-31 Identities = 216/306 (71%), Gaps = 0/306 (0%) Strand=Plus/Minus Query 15942 CGCATCAGCGTGCGGCTCATCGGCTGGTCGACGGCCCACATGTGCGCCTCGGCCATCGTG 16001 |||| ||||| | || || ||||| ||||||| || ||||||||||| || ||| Sbjct 310 CGCACCAGCGAGGGGTGCAGCGGCTTGTCGACGTAGACCAACTGCGCCTCGGCGATGGTG 251 Query 16002 TCGGCGATCACCTGCGCACTGCGCACATAGTTCTCGAACGCCCACAGCTTGTCCTCGGAA 16061 ||||| | | |||||| |||| || ||||||| || ||||| || ||| Sbjct 250 TCGGCCAGGATCTGCGCCGTGCGGGTGGAGGTCTCGAAGGCAAACAGCGGCTCATCGCTG 191 Query 16062 CAGGTGCGCGATCCCCATAGACGGTAACCGTCCGCGTTCACCAGCGTGGTCACTTCGTGG 16121 ||||||||||||||||| | ||| |||| | ||| | ||||||||| | ||| | Sbjct 190 CAGGTGCGCGATCCCCAGAACTTGTACCCGTTGGAGTTGATCAGCGTGGTGATATCGGCG 131 Query 16122 CTGTTCAGGTAGCCCGCGTCGGTGTTCGGGTCCTGCAGGTCCCAGAACACGTCGCGGCTG 16181 || || ||| |||||||| ||| |||||||||||||| ||||| |||||| Sbjct 130 GCATTGAGCATGCCGGCGTCGGTCGCCGGATCCTGCAGGTCCCAATGGACGTCCCGGCTG 71 Query 16182 ATGCCCGTGACGCCGTTGACCACGACGTTCGAGATCGTCTTGTGCCAGCCGATCTCTTCG 16241 ||||| || |||||| || | ||||| || | || ||| |||||||| || || Sbjct 70 ATGCCGGTCACGCCGGCTACGGCCACGTTGGACAGCGACTTATGCCAGCCTTGCTGCTCA 11 Query 16242 TCGATC 16247 |||||| Sbjct 10 TCGATC 5 >seq1269 Length=1066 Score = 140 bits (154), Expect = 8e-29 Identities = 283/418 (68%), Gaps = 14/418 (3%) Strand=Plus/Minus Query 31276 CGCGGTTCTTCGCGCTGAAGGCGAGCATCTCCGTGCCGAGGCTCGCCGGGTTGTCGGTGA 31335 || ||||||| || |||||| ||||| | || |||| ||| ||||| || || | Sbjct 958 CGGGGTTCTTGGCCGAGAAGGCCAGCATGTTGGTTCCGATGCTGGCCGGCGAATCCGTCA 899 Query 31336 CGGCGAGGCCGACGAGGTACGCCTCGCCGGTGCCGGCGAAATCCGGATCGACTTCCATCG 31395 || | |||||| ||||| |||| |||| || |||| || ||||| | | || || Sbjct 898 CGCCCAGGCCGTACAGGTAGGCCTTGCCGCTGTCGGCAAATTCCGGGGCAATCTCGATGC 839 Query 31396 ACGTGTAGACCTTCTGGCGCTGCTCGGTCGTCATCGCAATCAGGTCTTTCGTCGGCGAGA 31455 ||| |||||||||| || || | ||| | | |||||| ||||| || Sbjct 838 TGGTGAAGACCTTCTGCTTGCGCACGTTGACCATGTCGACCAGGTCAGCGGTCGGGTCGA 779 Query 31456 GCTGCGCGAACAACCGCATCTT--TCCGTCCTGC----------TCTTCGGCCTTCAGCG 31503 ||| ||||||| | |||||| || || || ||||||||||| | || Sbjct 778 CCTGGGCGAACAGCGCCATCTTCTTCTTGCCGGCGATTTCGACTTCTTCGGCCTTGACCG 719 Query 31504 CGATCACGTCGCCGTACGCGCGGAATGCGCCATCCGGATAGAGC-CCGCGAATGTGTTCC 31562 ||| |||||||||||| |||||||| | || ||||| || || | ||| ||| ||| Sbjct 718 CGACCACGTCGCCGTAGGCGCGGAACGGGCTGTCCGG-CAGCGCGCTGCGGTAGTGCTCC 660 Query 31563 ATGTTGATGCGCGCGCCGTATACCGCCGGGTCGTACGTGCGCGCCATCTGTTCGAGCATC 31622 || ||| || |||||||| ||| |||||||||| || ||||| | ||| | | Sbjct 659 ATCCAGATCCGGGCGCCGTAGACCTCCGGGTCGTAGGTTTCAGCCATTTCCACGATCTGC 600 Query 31623 GCGCGATCGATCGTGCGCCCGTCCGTTGTCGCGCCTTCGGTCGCGATCCGGAAAAACT 31680 ||| |||||| ||| || || || || ||||||||| || | ||||| |||| Sbjct 599 TGGCGCTCGATCACGCGGCCATCGGTGGTGGCGCCTTCGACAGCCACACGGAAGAACT 542 >seq2422 Length=594 Score = 96.9 bits (106), Expect = 8e-16 Identities = 187/271 (69%), Gaps = 4/271 (1%) Strand=Plus/Minus Query 33304 CAGCTCGTCACGAAGTTTTTCCCGGCCGCGACGCCGTTCCACTACTCGGTGGAAATCAAG 33363 ||||| ||| |||| ||||||| ||| | ||| ||||||| || | ||| Sbjct 590 CAGCTGGTCCGCCAGTTCTTCCCGGGGTTGACCACCTTCAGCTACTCGCCCGAGGTGAAG 531 Query 33364 ACCGCGCTGGTGATGAAGGCGCAGAACGTGATCCGCAAGGGTCGGCTCGAGTTCGACGCC 33423 || ||||||| | |||||| | || ||| || | || || || | |||||| Sbjct 530 ACGCGGCTGGTGCTCAAGGCGTTCGATGTCATCAAGAACGAGCGTCTGGAATATGACGCC 471 Query 33424 GGCTGGAACGATCTCGCCGCGTCATTCATGGCGATCAAGAAAACCATCACGCCCAGCGGC 33483 ||||||| ||| | || ||| | | || ||| |||| |||| |||| |||||||| Sbjct 470 GGCTGGACCGACATGACCCAGTCGCTGCTTGCCATCCAGAAGACCAGCACGGCCAGCGGC 411 Query 33484 CTGCAGGTCACGTACAAGGCGAGCCGCTCG-GAAGAAGCGAGCCACGGCGATCTCGCCTG 33542 | ||| ||| |||| |||| | |||||| | | | || |||||| |||||| || || Sbjct 410 CGACAGACCACCTACACGGCGGGGCGCTCGCGCACGACCG-GCCACGCCGATCTGGCGTG 352 Query 33543 GGCG-TGCATGCACGCGCTGGCGAACGAGCC 33572 |||| ||| |||| || ||| |||||| || Sbjct 351 GGCGCTGC-TGCATGCCCTGCAGAACGAACC 322 >seq3688 Length=631 Score = 93.3 bits (102), Expect = 1e-14 Identities = 108/146 (74%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 9862 CCAAGGCGCAGATCCGCGCCCGGGTCGAGCATCCGTTTCATGTCGTGAAGAACCTGTTTC 9921 ||||||| ||| | || ||| ||||||||||||||| | || | ||| || ||| Sbjct 95 CCAAGGCTCAGGTACGAGCCAAGGTCGAGCATCCGTTCCGGGTGATCAAGCGCCAGTTCG 154 Query 9922 GTCATCGCAAGGTGCGCTACAAGGGTCTAGCCAGGAACACGGCACAGCTGTTCAGTCTGT 9981 || || |||||||||| | ||||| || | ||||||||| || ||| | | |||| Sbjct 155 GTTATGTGAAGGTGCGCTTCCGTGGTCTGGCGAAGAACACGGCGCAACTGATGACGCTGT 214 Query 9982 TCGCGCTGGCGAACCTGGTGATCGCG 10007 |||||||| |||||||| ||| ||| Sbjct 215 TCGCGCTGTCGAACCTGTGGATGGCG 240 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 119014684221832