Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20deminutivum_20[genbank_20GCA_5F900092275.1_202017- 01-02] 13,382 sequences; 45,801,537 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq1242 170 2e-37 seq126 84.2 3e-11 >seq1242 Length=39269 Score = 170 bits (188), Expect = 2e-37 Identities = 272/386 (70%), Gaps = 6/386 (2%) Strand=Plus/Plus Query 159409 TCAGCACATGGAACTAATCCTGCATCAGCAGTGATGGCAGGGATGAAAGTTGTAGGTGTC 159468 || || |||||||| ||||| || || |||| ||||| || |||||| |||| || Sbjct 15273 TCTGCTCATGGAACCAATCCGGCTTCTGCAGCAATGGCCGGAATGAAAATTGTGATCGTT 15332 Query 159469 AAGTGTGATGATGATGGCAACATAGACATCAAAGATCTAGAGAAGAAAGCAATCATGA-- 159526 || | | ||| | || || ||||| | | || || | ||||| || || Sbjct 15333 AAATCTCTTGAAAACGGAAATATAGATGTAGAGGACCTTAAAGCTAAAGCC--CAGGAGC 15390 Query 159527 ATACATTTGAACTGTCATGTATTATGATTACATATCCATCTACACATGGTGTATTTGAAA 159586 ||| | ||| || || ||| | ||| | || || || ||||| |||||||| || ||| Sbjct 15391 ATAAAAATGAGCTTTCCTGTTTAATGGTCACTTACCCTTCTACCCATGGTGTGTTCGAAG 15450 Query 159587 CAAACATCAGACAGATATGTAAGATTGTTCATGAGAATGGTGGTCAGGTATATCTTGATG 159646 || ||| | | || || || || | ||||| || || || ||||| ||| | |||| Sbjct 15451 AAAGCATTATTGACATCTGCAACATCATCCATGAAAACGGAGGACAGGTTTATATGGATG 15510 Query 159647 GTGCAAATCTAAATGCACAGGTAGGTCTAGCAAAACCATGTGACTAT-GGTGCAGATGTA 159705 |||||||| | |||||||| |||||| || | | || | | ||| ||||| || || Sbjct 15511 GTGCAAATATGAATGCACAAGTAGGTTTAACCAGTCCCGGACA-TATCGGTGCTGACGTC 15569 Query 159706 TGTCATCTAAACTTACATAAGACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTA 159765 ||||| || ||| | || || || || || |||||||| || ||||| ||||||||| | Sbjct 15570 TGTCACCTGAACCTGCACAAAACTTTTTGCATTCCACACGGTGGTGGTGGTCCTGGCATG 15629 Query 159766 GGTCCTATTGGTGTAGCAAAACATCT 159791 |||||||| ||||| |||||||| || Sbjct 15630 GGTCCTATCGGTGTTGCAAAACACCT 15655 >seq126 Length=461790 Score = 84.2 bits (92), Expect = 3e-11 Identities = 132/189 (70%), Gaps = 0/189 (0%) Strand=Plus/Plus Query 157921 ATACAGCGAAACGTTCTTGAGAATCCTAGTTGGTACACATCTTACACTCCCTATCAAGCT 157980 || ||| ||||| | | || ||||| | ||||| || ||||||| || ||||| || Sbjct 423885 ATTCAGAGAAACATCTTCGAAAATCCAGGATGGTATACGGCTTACACACCTTATCAGGCA 423944 Query 157981 GAGATATCTCAGGGAAGATTGGAAGCTTTATTCAATTACCAAACGCTCATCACAGAACTC 158040 || || |||| || | || |||||| | || |||| ||| || | | | || | Sbjct 423945 GAAATTGCTCAAGGTCGTTTAGAAGCTATTTTGAATTTCCAGACTACCGTTATCGAGTTA 424004 Query 158041 ACAGGACTACCGATAGCAAACGCATCTCTATTAGATGAAGCAACTGCAGCAGCAGAAGCA 158100 || ||| | || ||||| || ||| |||||||||||| ||| || || |||||||| Sbjct 424005 ACTGGAATGGAAATCGCAAATGCTTCTTTATTAGATGAAGGAACGGCTGCTGCAGAAGCT 424064 Query 158101 ATGCTGTTA 158109 ||| |||| Sbjct 424065 ATGGCGTTA 424073 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 587952833735520