Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20deminutivum_20[genbank_20GCA_5F900092275.1_202017- 01-02] 13,382 sequences; 45,801,537 total letters Query= NC_015286.1 Length=175230 Score E Sequences producing significant alignments: (Bits) Value seq126 87.8 2e-12 seq5 86.0 7e-12 >seq126 Length=461790 Score = 87.8 bits (96), Expect = 2e-12 Identities = 67/77 (87%), Gaps = 3/77 (4%) Strand=Plus/Plus Query 17789 GGGCGAATAGCTCAGC-GGT--AGAGCTACTCGTTTACACCGAGTCGGTCGGGGGTTCGA 17845 |||||| ||||||||| ||| ||||| ||||||||||||||| |||||||||||||| Sbjct 441733 GGGCGATTAGCTCAGCTGGTTCAGAGCACCTCGTTTACACCGAGGGGGTCGGGGGTTCGA 441792 Query 17846 TCCCCTCTTCGCCCACT 17862 |||||| ||||||||| Sbjct 441793 ACCCCTCATCGCCCACT 441809 Score = 86.0 bits (94), Expect = 7e-12 Identities = 66/76 (87%), Gaps = 3/76 (4%) Strand=Plus/Plus Query 17789 GGGCGAATAGCTCAGC-GGT--AGAGCTACTCGTTTACACCGAGTCGGTCGGGGGTTCGA 17845 |||||| ||||||||| ||| ||||| ||||||||||||||| |||||||||||||| Sbjct 441963 GGGCGATTAGCTCAGCTGGTTCAGAGCACCTCGTTTACACCGAGGGGGTCGGGGGTTCGA 442022 Query 17846 TCCCCTCTTCGCCCAC 17861 |||||| |||||||| Sbjct 442023 ACCCCTCATCGCCCAC 442038 >seq5 Length=514667 Score = 86.0 bits (94), Expect = 7e-12 Identities = 66/76 (87%), Gaps = 3/76 (4%) Strand=Plus/Plus Query 17789 GGGCGAATAGCTCAGC-GGT--AGAGCTACTCGTTTACACCGAGTCGGTCGGGGGTTCGA 17845 |||||| ||||||||| ||| ||||| ||||||||||||||| |||||||||||||| Sbjct 79456 GGGCGATTAGCTCAGCTGGTTCAGAGCACCTCGTTTACACCGAGGGGGTCGGGGGTTCGA 79515 Query 17846 TCCCCTCTTCGCCCAC 17861 |||||| |||||||| Sbjct 79516 ACCCCTCATCGCCCAC 79531 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 560514224296800