Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20deminutivum_20[genbank_20GCA_5F900092275.1_202017- 01-02] 13,382 sequences; 45,801,537 total letters Query= NC_015938.1 Length=89916 Score E Sequences producing significant alignments: (Bits) Value seq232 96.9 2e-15 >seq232 Length=384298 Score = 96.9 bits (106), Expect = 2e-15 Identities = 150/213 (70%), Gaps = 1/213 (0%) Strand=Plus/Minus Query 72829 CATTAAGCCTTTGGCAGACTTCTTGGTTCCATCGTCAGTTGCAGGGTCTTTGAAGATTTC 72888 |||||| ||||||||||| || || ||||| ||||| || ||| |||||||||||| | Sbjct 86068 CATTAATCCTTTGGCAGATTTTTTAGTTCCGTCGTCTGTAATAGGATCTTTGAAGATTGC 86009 Query 72889 ACGAGGTTCACCATCAACGATACCCCATGTCGCCTTCATCGCCCAACCCAGAGTGTCACG 72948 | ||||| | || || | || || ||||| || |||| | ||| ||||| Sbjct 86008 TCTTCCCTCACCGTTTACTTCTCCGTAAGTTGCTTTCATTGCAAAACCAAAAGTATCACG 85949 Query 72949 AGTGACATACTGATAGGTGAACGAGCCGATACCCAGCACGACGTTGCTAGAGGCAAAGCC 73008 || || ||||| ||||| || || || || | || ||||| |||| ||||| || Sbjct 85948 TGTATTGTATTGATACGTGAAAGATCCAATTCCTAAAACCACGTTTGTAGAAGCAAAACC 85889 Query 73009 CTTAGCTTTCAGACGCTGGAAGATTTCCAGTTG 73041 || ||||| | | || | |||||| |||||| Sbjct 85888 TTTCGCTTTTAATCTCTCGCAGATTT-CAGTTG 85857 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 287559493373454