Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20deminutivum_20[genbank_20GCA_5F900092275.1_202017- 01-02] 13,382 sequences; 45,801,537 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq232 325 4e-84 seq2491 226 3e-54 seq77 138 1e-27 seq2141 91.5 2e-13 >seq232 Length=384298 Score = 325 bits (360), Expect = 4e-84 Identities = 828/1240 (67%), Gaps = 50/1240 (4%) Strand=Plus/Minus Query 47999 TGCGTCCTTGTAAAGCATAAAAGGTGTTCCAGTTTCTATCTGAGATTCAATGATAGATTT 48058 ||| || ||||| | |||| | |||||||| ||||| || |||||||||| ||| | Sbjct 341043 TGCATCTTTGTACAACATATATGGTGTTCCGGTTTCGATTTGAGATTCAAGGATTTTCTC 340984 Query 48059 CCAAACAGTC-CTAGCCTTTATAACAGCTCTAGCTTTATTATCATGTTCGTATTTAGTAT 48117 ||| | | || | ||| || ||| ||||||| | | |||||| | |||| Sbjct 340983 CCATA-ATTCACGAGCACGGATTGTTTTTCTTCCTTTATTTTGAAATTCGTAATCTGTAT 340925 Query 48118 ATAACTTCTCAAATTCATCCCCATACACATTATCTAACCCAGGACATTCATTAGGACACA 48177 |||| || || ||||| || ||||| |||| || ||| || ||||||||||| ||||||| Sbjct 340924 ATAATTTTTCGAATTCTTCACCATAAACATCATATAATCCCGGACATTCATTTGGACACA 340865 Query 48178 TCAATGACCAATCCTCATCATTTTTTACTCTAGTCATAAATATATCTGGTATCCAAAGAG 48237 | || | |||| ||| | | || | |||| || | ||||| |||| | | Sbjct 340864 TTAAAGTCCAAGTTGAATCTTCCTGAACACGTTTCATGAACAAATCTGAAGTCCACATGG 340805 Query 48238 CTATAAATAAATCCCTAGTTCTTAGTTCTTCATTGCCACTATTCCT-TTTAAGTTCAAGA 48296 | | |||||||| || | | | |||||| || || |||| | ||||| | ||||| Sbjct 340804 CGAAGAATAAATCTCTTGCACGCATTTCTTCTTTTCCTGTATTTTTCTTTAAATCCAAGA 340745 Query 48297 AAGTCCATTATATCAGCATGCCATGGTTCTAAATATATTGCCATTACACCTGGTCGTTTA 48356 || || | |||||||||||||| | ||| | || ||||| | |||| ||||| Sbjct 340744 AA-TCAAAAATATCAGCATGCCAGGTTTCGATGTAAATTGCAAAACTACCTTTACGTTTT 340686 Query 48357 TTACCTCCTTGATCTATATATCTGGCAGTATTGTTATAAACTCTTAACATTGGGACAATA 48416 || |||||||||| || | || |||| ||| ||||||| ||||| || ||||| Sbjct 340685 CCGCCGCCTTGATCTACGTAACGCGCTGTATCGTTGAAAACTCTCAACATCGGAACAATT 340626 Query 48417 CCATTTGATATACCATTGGTTCCCGAAATATAACTTCCACTAGCTCTTATATTACTAATT 48476 || ||||| | || || || || ||| ||| |||| | || | || ||| ||| Sbjct 340625 CCGTTTGAAGTTCCGTTTGTACCGCGAATGTAAGATCCAGTCGCACGTACGTTATGAATA 340566 Query 48477 GAAATACCTATACCACCTGCCATTTTAGATATTAGAGCACACCGTTTAAGGGTATCATAA 48536 |||| || || || || || | || ||| || |||| | |||||||||| Sbjct 340565 GAAAGTCCAATTCCTCCAGCTGACTGCGAGATTTTTGCGGTTTGTTTTAAGGTATCATAA 340506 Query 48537 ATTCCTTCTATACTATCATCTATCATATTTAATAGAAAACAACTAGACATTTGCGGATGA 48596 || || || ||||||||||| ||| | || |||||| |||||||||||| | Sbjct 340505 ATACCATCAATACTATCATCCTGCATTGCAAGTAAGAAACAAGAAGACATTTGCGGTTTT 340446 Query 48597 CAAGTTCCTGAATTAAATAATGTTGGAGATGCATGAATAAACCATTTCTCTGATAACAAT 48656 |||||||| |||||| || ||||| | |||||| |||| | || | || | || Sbjct 340445 GGAGTTCCTGCATTAAACAACGTTGGCGTTGCATGCGTAAAGAACTTTTTAGACATTAAG 340386 Query 48657 TTATATGTTTCAATAACAGAATCTATATCCCATTGATGTATACCTATAGATACACGCATT 48716 | || |||||||| || || | || ||| | || ||||| | ||| ||||||||| Sbjct 340385 TCGTAAGTTTCAATTACCGATTTTAAATCGTCTAAGTGAATACCAACAGAAACACGCATT 340326 Query 48717 AACATATATTGAGGTCTTTCAACAATTTTGTTATTTATTTTCAAAAGATATGATTTTTCC 48776 ||||| | || || | || || ||||| |||||||| | |||||| || || Sbjct 340325 AACATGTGCTGTGGACGCTCTACGATTTTTCCGTTTATTTTAAGAAGATAAGAACGCTCT 340266 Query 48777 AATGTTTTAAAACCAAAATAGTTGT-ATGAAAAGTCGTTATCATTAATAAT-TGATGAAT 48834 || ||||| ||||||||||| | || || |||| | || | || |||||| ||| |||| Sbjct 340265 AAGGTTTTGAAACCAAAATAATCGTAATTAAAATCCCTTGT-ATAAATAATATGA-GAAT 340208 Query 48835 TT----ATTC-----TTTCCT---TATGTTTATATACTACAT---CCATTA------CAT 48873 | || | |||||| | ||| ||||| ||| | | || ||| Sbjct 340207 CTAAAAATGCCGCGTTTTCCTGAATTACTTTGTATACATCATCTGCAACTAATGGAGCAT 340148 Query 48874 -TTTTTGATATAATTGAT-----TCCTTGTAAAGATCTTCTACAACAT---CACTAAATA 48924 || | || | | ||| | ||||| | |||| | || | | | ||| | Sbjct 340147 CTTGTCCATTTCTTGGATTTACGTAGTTGTACATATCT--TTCATCGTTTCCGAGAAAGA 340090 Query 48925 ttttttttGTTTCTTTATGAAGATTAGATATAGATATTCTAGCAGCTAATATAGCATAAT 48984 |||||| || | | ||| |||||||| |||| || | ||| || ||| ||||||| Sbjct 340089 -TTTTTTAGTATTTGAATGTAGATTAGAAATAGCGATACGAGCTGCCAATTGTGCATAAT 340031 Query 48985 CTGGATG---AATTGTTGTACATGTACTAGATATTTCTGCTGCTAATATATCTAATTCTT 49041 ||||||| ||| || || | | || | |||||||||| | |||| ||||| Sbjct 340030 CTGGATGCGCAATAGTCATAGAAG--CT-GCCGTTTCTGCTGCAAGATTATCCAATTCAG 339974 Query 49042 TAGTAGTTACACCTGTATATATTCCTTGAATAACTTTCATTGCTATATTTACTGGATCTA 49101 ||| | || || ||| | ||||| |||||| |||| |||| ||||| ||||||| Sbjct 339973 AAGTCGAAACCCCATCATACAATCCTTCGATAACTCTCATCGCTACCTTTACCGGATCTA 339914 Query 49102 TATGATCCATATCCAGTCCATAACATAAtttttttATTCTAGATGTAATTTTATCAAACA 49161 | || || || || ||||| |||||||| ||||| |||||| |||||||||| Sbjct 339913 CGAGCTC---ATTCAAGCCGTAACACAATTTTTTGATTCTTTCTGTAATCTTATCAAACA 339857 Query 49162 TTATATTCTCTTTACGACCGTCACGTTTTATAACAAACAT 49201 ||| |||| | | || || | ||||| ||| |||| Sbjct 339856 TTACCGGCTCTCTGTGGCCATCTCTTTTTACTACATACAT 339817 Score = 302 bits (334), Expect = 5e-77 Identities = 658/960 (69%), Gaps = 34/960 (4%) Strand=Plus/Minus Query 18670 TTTTGATATTCGGCAACTCTTTTTTCAAAGAAATTAGTTTTTCCCTCTAATGATATACAT 18729 |||||||| || ||||| | |||||||||||||||||||||||||| | ||| || ||| Sbjct 339490 TTTTGATACTCTGCAACACGTTTTTCAAAGAAATTAGTTTTTCCCTGAAGTGAAAT-CAT 339432 Query 18730 -TCCATAAAATCAAATGGATTTTTTACATTATATAtttttttGAATCCTAATTCTAATAG 18788 ||||| ||||| ||||||||| | || | | | || ||||||| || Sbjct 339431 ATCCATGAAATCGAATGGATTTGCTGATCCGTAAACACGCTCACAGCCCAATTCTACTAA 339372 Query 18789 TAGTCTATCCGCTACAAATTTAATATA-TGTGTTCATCATATCACAATTCATTCCTATTA 18847 || |||||| || || || | | ||| ||||| ||| | | || ||||| || |||| Sbjct 339371 TAATCTATCGGCAACGAACTCTAAATACTGTGT-CATAAGACCAGCGTTCATACCAATTA 339313 Query 18848 ATTTAACAGGTAGTGCATCTGTAAGAAATTCTTGTTCTATATTTACTGCCTCTGATATAA 18907 | | || || || | ||||| | ||||| | ||| |||| || || || |||| Sbjct 339312 AACTTACCGGAAGAGATTCTGTGATAAATTGTCTTTCGATATCTAAAGCATCGACAATAA 339253 Query 18908 TAGATACAACTCTATCTTCATTAGGAGG--GTATAGAAGATGTTTAAACATCA----AAC 18961 | | || |||||||| || | | || || | ||| | | || ||| Sbjct 339252 TTTCTTTAATTCTATCTT--TTGGCACTTTGTTTACCAAATGGTGATTGTGCAGGTGAAC 339195 Query 18962 ATGCAAAATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAAC 19021 |||||||||||||||| || ||||| | | |||||||||||||| |||||||||| Sbjct 339194 C-GCAAAATCACAATGTACACCTTCGTCACGAGAAATCAATTCATTAGAGAATGTTAAAC 339136 Query 19022 CAGGCATCAGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAATA 19081 | ||||| | || | |||||| ||||| | || ||| || | ||| || || || | Sbjct 339135 CTGGCATTAAACCACGTTTTTTCAACCAATAAATTGAACAGAAAGCTCCCGAGAAAAAGA 339076 Query 19082 TACCTTCTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTAGCATCATTATTATGAA 19141 | ||||| ||||| |||||||||| ||||||||| || | | |||| ||| | Sbjct 339075 TTCCTTCAACTGCAGCAAAAGCAATTAGTCTTTCAGCAAAT---GAATCAG-ATTCG--A 339022 Query 19142 TCCATTTCAGTGCCCAATCAGCCTTCTTTTTTACACATGGCATTGTCTCTATAGAATTAA 19201 ||||||| | ||||| || || || || || | || | |||| || ||||| Sbjct 339021 TCCATTTTAAAGCCCATTCTGCTTTTTTCTTAATTGCAGGAAAAACTTCTAAAGCATTAA 338962 Query 19202 ATAGATACATACGCTCATCTGTATCTTTAACATATGCATCTATCAATAAACTGTACATTT 19261 | | | || || ||||| ||||| | ||| || |||||| || | | Sbjct 338961 ACAACTCTGATTTTTCTGCTTCGTCTTTTACATACGTATCAATTAATAAAGAATAAGTCT 338902 Query 19262 CTGAATGAATATTTTCTATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCTGT-TATC 19320 | |||||||| || || ||||| || || ||||| | ||||||| | ||| Sbjct 338901 CACTGTGAATATTCTCCATCATGATCTGGAAACCATAAAAGAACTTTGCTTCGGCGTAT- 338843 Query 19321 TGTACTTCACTA-CAAAATCTTTCGACCAAATTTTCATTAACTATTCCATCACTAGCTGC 19379 || || || || |||||| | || ||| |||||| || || ||||| || ||| || Sbjct 338842 TGAACCTCGTTAACAAAAT-TCTCAGCCAGATTTTCGTTTACGATTCCGTCTGAAGCAGC 338784 Query 19380 AAAAAATGCTAATACATGTTTAATAAAAT---GTTTTTCATC-TGAGGTTAATGTATTCC 19435 |||||||||||| | ||||||||| |||| ||| || || | | ||| || |||||| Sbjct 338783 AAAAAATGCTAAAATATGTTTAATGAAATAACGTTCGTCGTCATTAAGTTTAT-TATTCC 338725 Query 19436 AATCATTAATATCTTTAGATAAATCTACTTCTTCAACTGTCCAAAAAGAAGCCTCTGCTT 19495 |||| | | ||| | | |||||| | |||||| | ||||| ||| ||| || || Sbjct 338724 AATCTGTTAAATCCTGATGTAAATCGATTTCTTCGGCAGTCCAGAAACTAGCTTCCATTT 338665 Query 19496 TTTTATACATGTTCCATATATCACGATATTGTATAGGAAATATAACAAATCTatttttat 19555 |||||||| | ||| |||||| ||| || |||||||| ||||| || | |||||||| Sbjct 338664 TTTTATACCATTCCCAAATATCATGATGTTTGATAGGAAAAATAACGAAACGATTTTTAT 338605 Query 19556 tttctt-taagaataggttccattttttgaaaaataataatttcttttcaatattttata 19614 |||||| |||| || ||||| | |||| | || | ||||| | || ||| ||||||| Sbjct 338604 TTTCTTGTAAG-ATTGGTTC---TACTTGAGACATGACAATTTTTGTTTAAT-TTTTATA 338550 Score = 105 bits (116), Expect = 8e-18 Identities = 316/473 (67%), Gaps = 21/473 (4%) Strand=Plus/Minus Query 46983 GTAAACTTAATTGGAT-TACTCGCTGATTTTGTTCGTAAATAATACATACCAGTCTTTAA 47041 || || ||||| | || ||| |||| |||||||| || |||||||| || || ||||| Sbjct 342071 GTGAATTTAATCGCATCTACA-GCTGCTTTTGTTCTTAGGTAATACATTCCTGTTTTTAA 342013 Query 47042 ACCTAAACT-CCATCCATAGAAATGCATACTAGTTAATTTAGAATAACTAGGTTC-TGAA 47099 ||| | ||| ||| | ||||| ||||| ||| | ||||||||| | | || || | Sbjct 342012 ACC-AGACTGCCAAGCGTAGAAGTGCATTGAAGTAAGTTTAGAATAGTTGGCATCCTGCA 341954 Query 47100 ATATGAATATTAAGAGATTGACTCTGATCAATAAATGCACCTCTATCAGCTGCCATATCT 47159 | || |||| || ||| |||||| ||||| ||||| | | |||||| Sbjct 341953 TGAACAAGTTTAAT-GACTGAGACTGATCGATAAAGTATCCTCTCTGGCGAGACATATCG 341895 Query 47160 AAAATAACCCTTTGTGGTATCTCCCATACTGTTTTATAAATTTGTTTAATGTCTTCTGGG 47219 | |||| | | | || ||||| |||||||| || | || ||| | ||||| || Sbjct 341894 ATAATATCTTTCATCGACATTTCCCAAACTGTTTTGTACAGTTCTTTTAAGTCTTGCGGA 341835 Query 47220 AGATTAGTA---TTTTGAATAGATCCTCCgttttctataattttgttttttaat---tca 47273 | | || | ||||||| |||||| | || |||| | ||| || ||| Sbjct 341834 ATAATATCAATGTTTTGAACAGATCCATTATGACGCATGATTTCCTGTTTCAACGACTCA 341775 Query 47274 tttgaccaaagttttcgttc-agttaatgtttt--taaAAGATGAGGATTAACAATTTGA 47330 || ||| | | || ||| | | ||| | |||| | | | ||| || | | Sbjct 341774 TT---CCATAATCCTCTTTCTACTAAATCGTGAAGTAAATGTTT--GTTTACCACGAT-A 341721 Query 47331 AATTCTCCAGATAGTACTCTACGGCTATATATATTACTTGTATATGGTTCTATAGATTCA 47390 ||||||||||||||||| | ||| | || || || ||||||||||| | || ||| Sbjct 341720 AATTCTCCAGATAGTACACGACGAGTGTAAATGTTTGAAGTATATGGTTCGAAAGCTTCG 341661 Query 47391 TTATTTCCAAAAATTTGAGCAGTTGATGCTGTAGGCATGGATGCAACTAATAA 47443 || ||||| ||||| |||| ||| |||||||| ||||| | || |||||||| Sbjct 341660 TTGTTTCCTAAAATCTGAGAAGTCGATGCTGTTGGCATTGGCGCCACTAATAA 341608 >seq2491 Length=10632 Score = 226 bits (250), Expect = 3e-54 Identities = 654/992 (66%), Gaps = 22/992 (2%) Strand=Plus/Minus Query 18584 TATATTTTAGTTGATTGTTATGTTATGGTTAAAAATCAACATCCAAAGAAAAAG---AA- 18639 |||| |||||| | || || | | | |||||||||| |||||| || || | || Sbjct 4954 TATACTTTAGT-GTTTCTTTGGCTGGGCTTAAAAATCATCATCCAGGGAGAAGGCCGAAG 4896 Query 18640 --TTCTCTTCATTAGAATTCATTACTCCCATTTTTTGATATTCGGCAACTCTTTTTTCAA 18697 || ||||| |||| ||| || || |||||||||| || | || | ||| |||| Sbjct 4895 CTTTATCTTCCGTAGAGGTCAACACCCCGCTTTTTTGATAATCACCCACACGTTTCTCAA 4836 Query 18698 AGAAATTAGTTTTTCCCTCTAATGATATACAT-TCCATAAAATCAAATGGATTTTTTACA 18756 ||||||| ||||| || | | || || ||| |||||||||||||| ||||| | || Sbjct 4835 AGAAATTGGTTTTGCCTTGCAGGGAGAT-CATCTCCATAAAATCAAACGGATTGGTGGCA 4777 Query 18757 TTATATAtttttttGAATCCTAATTCTAATAGTAGTCTATCCGCTACAAATTTAATATA- 18815 | ||||||||| | | || | ||| || ||| || || ||||| | |||||| Sbjct 4776 TGATATATTTTGGTATAACCCAGTTCCTGCAGCCATCTGTCTGCAACAAACTCAATATAC 4717 Query 18816 TGTGTTCATCATATCACAATTCATTCCTATTAATTTAACAGGTAGTGCATCTGTAAGAAA 18875 |||| ||||| | |||||| || || | ||| || | |||||||||| ||| Sbjct 4716 TGTG-ACATCAGTTTTGCATTCATCCCGATCAGGGCAACCGGCAAGGCATCTGTAATAAA 4658 Query 18876 TTCTTGTTCTATATTTACTGCCTCTGATATAA-TAGATACAACTCTATCTTCATTAGGAG 18934 ||| | ||| || | ||| || || |||| | || | || || | || Sbjct 4657 TTCCTTTTCGATTTCTACCGCGTCGCGGATAATTCCATGAACGACTTCCTGGCTCAGTTT 4598 Query 18935 GGTATAGAAGATGTTTAAACATCAAACATGCAAAATCACAATGTAGTCCCTCGTCTCTAC 18994 | | || || |||| | | || || ||||| |||||||| | ||||| ||||| Sbjct 4597 ATTTTTGAGCAT-TTTATAAAGCAGGCAGGCAAATTCACAATGCATCCCCTCATCTCTGG 4539 Query 18995 TTATCAATTCATTAGAAAATGTTAAACCAGGCATCAGTCCTCttttttttAACCAGAATA 19054 ||||| |||||| ||| |||| || |||||||| ||||||||||| |||||||| | Sbjct 4538 AAATCAACTCATTACTAAAGGTTAGCCCTGGCATCAGGCCTCTTTTTTTCAACCAGAAGA 4479 Query 19055 TAGAAGCAAATGATCCAG-AAAAGAATATACCTTCTACTGCTGCAAAAGCAACTAGTCTT 19113 | ||| || | | ||| | ||||| || ||||| ||||| || ||||| || | | | Sbjct 4478 TCGAA-CAGAAGCTCCCGCTGAAGAAAATGCCTTCCACTGCGGCGAAAGCCACCAAACGT 4420 Query 19114 TCTCCATAACTAGCATCATTATTATGAATCCATTTCAGTGCCCAATCAGCCTTCTTTTTT 19173 || || || | | | | |||||| || |||||| || || || || ||| Sbjct 4419 TCGGCAAAATTTCCGCC------CTCAATCCAGCGCAATGCCCATTCTGCTTTTTTCTTT 4366 Query 19174 ACACATGGCATTGTCTCTATAGAATTAAATAGATACATACGCTCATCTGTATCTTTAACA 19233 ||||| || | ||||||| | || || || || || | |||||||| | Sbjct 4365 ACACAAGGAACCGTCTCTACGGCATGGAACAGCCTGTCTTTTTCTTCAGGATCTTTAATA 4306 Query 19234 TATGCATCTATCAATAAACTGTACATTTCTGAATGAATATTTTCTATAGCCATCTGAAAT 19293 || | ||| |||| | || |||| || || || ||||| || ||||| || Sbjct 4305 TAGGTATCGATCAGCAGCGCATAGGTTTCAGAGTGGATGTTTTCCATCATGATCTGGAAG 4246 Query 19294 CCGTAAAAACATCTTGCTTCTGTTATCTGTACTTCACTACAAAATCTTTCGACCAAATTT 19353 || |||||||| | ||||| | | ||||||||| || || | | | | ||| Sbjct 4245 CCATAAAAACAACGGGCTTCGGGAAGCTGTACTTCGCTCATGAAGTTCACTGCAAGGTTT 4186 Query 19354 TCATTAACTATTCCATCACTAGCTGCAAAAAATGCTAATACATGTTTAATAAAATGTTTT 19413 ||||| || || || ||||| || |||||||| || | || ||| ||| ||||| Sbjct 4185 TCATTTACAATGCCGTCACTTGCAGCAAAAAAAGCAAGTATATGAGAAATGAAATGACGC 4126 Query 19414 TCATCTGAGGTTAATGTATTCCAATCATTAATATCTTTAGATAAATCTACTTCTTCAACT 19473 || ||| |||| | | ||| | || || | ||| | || | ||||||| | Sbjct 4125 TCGCCTGTATTTAAGTTGTCCCAGTGCTTCTGGTCATCAGAAAGGTCAATTTCTTCAGCG 4066 Query 19474 GTCCAAAAAGAAGCCTCTGCTTTTTTATACATGTTCCATATATCACGATATTGTATAGGA 19533 ||||| ||| || || || |||||||| | ||| || ||| | |||| ||||| Sbjct 4065 GTCCAGAAACTTGCTTCACTCTTCTTATACATTTCCCAGATTTCAGGGTATTTAATAGGC 4006 Query 19534 AATATAACAAATCTatttttattttct-ttaa 19564 || | |||||| | | || |||||| |||| Sbjct 4005 AAAAGAACAAAGCGGTCCTTGTTTTCTCTTAA 3974 Score = 206 bits (228), Expect = 3e-48 Identities = 607/923 (66%), Gaps = 24/923 (3%) Strand=Plus/Minus Query 47886 GATGCTAGATTACATACAGCTACCTCAT--TTGGATTAGTATATTGTATTATTTCAGCAC 47943 || || || ||||||||||| ||||| | ||||| |||||| | ||| ||||| | || Sbjct 6379 GAGGCCAGGTTACATACAGCAACCTCGTCTTTGGA--AGTATACTCTATAATTTCTGTAC 6322 Query 47944 ATAGATTACCACATTTGATAGTACCCAAATTTTGATGATT--ATTNNNNTTGTTACATGC 48001 | || || || |||||| || || |||||||| || || ||| |||| ||| Sbjct 6321 AAAGGTTGGAACTTTTGATGGTTCCTAAATTTTGCTGGTTGGATTTGC--TGTTTGCTGC 6264 Query 48002 GTCCTTGTAAAGCATAAAAGGTGTTCCAGTTTCTATCTGAGATTCAATGATAGATTTCCA 48061 || || || | || | |||| ||||| ||||| ||||| || || | || | ||| Sbjct 6263 ATCTTTATACAACAGATAAGGGGTTCCGGTTTCAATCTGTGAATCCAGAATGGCAAACCA 6204 Query 48062 AACAGTCCTAGCCTTTATAACAGCTCTA---GCTTTATTATCATGTTCGTATTTAGTATA 48118 || || | ||||| | | | || || || | |||||| ||| Sbjct 6203 AAGC-TCTTGTGCTTTA--ATGGTTTTACGGGCACGTCCTTCTTTTTCGTAACGCTCATA 6147 Query 48119 TAACTTCTCAAATTCATCCCCATACACATTATCTAACCCAGGACATTCATTAGGACACAT 48178 ||| || ||||| | ||| | || | | || || ||||| |||||| | Sbjct 6146 TAAAGCATCGAATTCTGCACCAAAGCAATCTGCCAGTCCCGGGGCTTCATGAGGACAGAA 6087 Query 48179 CAATGACCAATCCTCATCATTTTTTACTCTAGTCATAAATATATCTGGTATCCAAAGAGC 48238 || ||| || | | | || ||| || |||| || | || || |||||| || Sbjct 6086 TAAACTCCAGTCTCCGTTTTCTTCTACCCTTCTCATGAACAGGTCACATACCCAAAGGGC 6027 Query 48239 TATA-AATAAATCCCTAGTTCTTAGTTCTTCATTGCCACTATTCCTTTTA---AGTTCAA 48294 ||| |||||||| || | | |||||||| || ||| || |||| || || | Sbjct 6026 -ATAGAATAAATCTCTGGCACGAAGTTCTTCTTTACCATGGTT---TTTACGCAGGTCCA 5971 Query 48295 GAAAGTCCATTATATCAGCATGCCATGGTTCTAAATATATTGCCATTACACCTGGTCGTT 48354 |||| || | ||| ||||||||||| || | || || || | ||||| |||| Sbjct 5970 GAAAACTCAGCACATCTGCATGCCATGGCTCCAGGTAAATGGCAAAAGCACCTTTACGTT 5911 Query 48355 TATTACCTCCTTGATCTATATATCTGGCAGTATTGTTATAAACTCTTAACATTGGGACAA 48414 || || || || || | ||| | ||| |||| |||| | ||| | ||||| || |||| Sbjct 5910 TACCTCCACCCTGGTCCACATAACGGGCGGTATCGTTAAATACTTTCAACATAGGTACAA 5851 Query 48415 TACCATTTGATATACCATTGGTTCCCGAAATATAACTTCCACTAGCTCTTATATTACTAA 48474 | ||||| | || || ||||| ||||||| ||| | || | || ||| | Sbjct 5850 TCCCATTGCTGGTCCCGTTTGTTCCACCAATATAAGATCCCGTGGCACGGATGTTATGGA 5791 Query 48475 TTGAAATACCTATACCACCTGCCATTTTAGATATTAGAGCACACCGTTTAAGGGTATCAT 48534 | | ||| ||||||||||| ||| || ||| ||| |||| | ||||| | Sbjct 5790 TGCTTAAACCAATACCACCTGCGCTTTGTGAAATTTTAGCGGTTTGTTTTAAAGTATCGT 5731 Query 48535 AAATTCCTTCTATACTATCATCTATCATATTTAATAGAAAACAACTAGACATTTGCGGAT 48594 |||||||||| ||||| || || ||| | | || ||| || ||||||||| || | Sbjct 5730 AAATTCCTTCAATACTGTCGTCCTGCATGGTCAGTAAAAAGCAGGAAGACATTTGAGGTT 5671 Query 48595 GACAAGTTCCTGAATTAAATAATGTTGGAGATGCATGAATAAACCATTTCTCTGATAACA 48654 | || ||| ||||||||| ||||| | |||||| ||||||| ||| | || Sbjct 5670 TAGGGGTAGCTGCATTAAATAAAGTTGGGGTTGCATGCGTAAACCAGCGCTCACTCATCA 5611 Query 48655 ATTTATATGTTTCAATAACAGAATCTATATCCCATTGATGTATACCTATAGATACACGCA 48714 ||||| ||| |||| || || ||||| || || || |||| | ||||||| Sbjct 5610 GGTTATACGTTGCAATCGCACTTTCAATATCTTCTTTGTGAATCCCTACGGCAACACGCA 5551 Query 48715 TTAACATATATTGAGGTCTTTCAACAATTTTGTTATT-TATTTTCAAAAGATATGATTTT 48773 | |||| || ||| || | ||| |||| ||||| || |||||||| ||||| |||||| Sbjct 5550 TAAACAAATGTTGCGGGCGTTCTACAA-TTTGTCCTTCTATTTTCAGCAGATAGGATTTT 5492 Query 48774 TCCAATGTTTTAAAACCAAAATA 48796 || | |||||||| |||||||| Sbjct 5491 TCAAGGGTTTTAAACCCAAAATA 5469 >seq77 Length=77744 Score = 138 bits (152), Expect = 1e-27 Identities = 189/264 (72%), Gaps = 0/264 (0%) Strand=Plus/Minus Query 65886 AGATATTGTAGAGTTTTGTGAAAATATGGCAAATAAAGGAAAAATAGTGATAGTTGCAGC 65945 |||| ||||| ||| ||||| | |||| ||| ||||||| | |||||||| ||||| Sbjct 26456 AGATGTTGTAACATTTAGTGAAGACCTGGCGAATCAAGGAAAGACTGTGATAGTGGCAGC 26397 Query 65946 ATTGGATGGAACATTTAAAAGAAAACCTTTTGGTAATGTATTAAATTTAATTCCATTATC 66005 |||||||||||||||| |||| || || ||||||| ||| || | || ||||| | Sbjct 26396 ATTGGATGGAACATTTCAAAGGAAGCCATTTGGTAGTGTTTTGGAGTTGGTTCCAAAGGC 26337 Query 66006 TGAAACAGTAACAAAACTTACAGCTGTGTGTATGAAATGTTTTAAAGATGCATCTTTTTC 66065 || | ||||||| | || || || ||||||| ||||| ||||| | ||||| Sbjct 26336 AGAGAGTATAACAAAGTTGACTGCCGTTTGTATGATATGTTACCGTGATGCTGCATTTTC 26277 Query 66066 AAAACGTATAGGTACAGAAACAGAGATAGAAATTATAGGCGGTAAAGATAAATATCTATC 66125 ||| | |||| | | || | | ||| | ||||| ||| ||| |||||| |||| Sbjct 26276 TAAAAGAATAGTTCCTGATGAGGCTGTTGAACTAATAGGTGGTTCAGACAAATATATATC 26217 Query 66126 TGTATGTAGGAAGTGTTATAATGA 66149 ||||||| | | |||||| |||| Sbjct 26216 TGTATGTCGTGAATGTTATCATGA 26193 >seq2141 Length=1138 Score = 91.5 bits (100), Expect = 2e-13 Identities = 206/304 (68%), Gaps = 7/304 (2%) Strand=Plus/Plus Query 19261 TCTGAATGAATATTTTCTATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCTGTTATC 19320 ||||||||||||||||| || || || || || || || |||||||| ||||| | || Sbjct 80 TCTGAATGAATATTTTCAATGGCAATTTGGAAACCATAGAAACATCTAGCTTCAGGGATT 139 Query 19321 TGTACTTCACTACA-AAATCTTTCGACCAAATTTTCATTAACTATTCCATCACTAGCTGC 19379 || || || ||| ||||| | |||| || ||||| || || |||||||| || || Sbjct 140 TGGACCTC-TGACATGAATCTGGTGGCCAAGTTCTCATTGACGATACCATCACTGGCAGC 198 Query 19380 AAAAAATGCTAATACATGTTTAATAAAATGTTTTTCATCTGAGGTTAA---TG-TATTCC 19435 ||| || || || || | | ||||||| || ||||| || || | || | | || Sbjct 199 AAAGAAAGCCAAGACGTTTGTAATAAAGTGACGTTCAT-TGTCATTGAGCTTGTTCTCCC 257 Query 19436 AATCATTAATATCTTTAGATAAATCTACTTCTTCAACTGTCCAAAAAGAAGCCTCTGCTT 19495 | || || || || | | | |||| || || | |||||||| || || || | Sbjct 258 ATTCGTTGATGTCACTTGCAAGGTCTATCTCCTCTGCAGTCCAAAAGCTTGCTTCAGCCT 317 Query 19496 TTTTATACATGTTCCATATATCACGATATTGTATAGGAAATATAACAAATCTatttttat 19555 | || || | ||||||||||| | | || || || | |||||||||| ||| | Sbjct 318 TCTTGTAGAGATTCCATATATCGGAGTGCTTGATTGGGAACAATACAAATCTATCTTTGT 377 Query 19556 tttc 19559 | || Sbjct 378 TCTC 381 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562014773250480