Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20deminutivum_20[genbank_20GCA_5F900092275.1_202017- 01-02] 13,382 sequences; 45,801,537 total letters Query= NC_016160.1 Length=36661 Score E Sequences producing significant alignments: (Bits) Value seq3951 176 1e-39 seq7676 89.7 1e-13 seq4833 89.7 1e-13 >seq3951 Length=514 Score = 176 bits (194), Expect = 1e-39 Identities = 109/117 (93%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 34898 ATGAGCAGAGTCACCGCGATTATCTCCGCTCTGGTTATCTGCATCATCGTCTGCCTGTCA 34957 |||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 352 ATGAACAGAGTAACCGCGATTATCTCCGCTCTGGTTATCTGCATCATCGTCTGCCTGTCA 411 Query 34958 TGGGCGGTTAATCATTACCGTGATAACGCCATCTCCTACAAAGAGCAGCGCGATAAA 35014 ||||| |||||||||||||||||||||||||| ||||||||| |||||||| ||| Sbjct 412 TGGGCTGTTAATCATTACCGTGATAACGCCATTACCTACAAAGCCCAGCGCGACAAA 468 >seq7676 Length=607 Score = 89.7 bits (98), Expect = 1e-13 Identities = 51/52 (98%), Gaps = 0/52 (0%) Strand=Plus/Plus Query 21020 ATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTTAAA 21071 ||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 49 ATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTTCAA 100 >seq4833 Length=1393 Score = 89.7 bits (98), Expect = 1e-13 Identities = 73/86 (85%), Gaps = 2/86 (2%) Strand=Plus/Plus Query 21049 TCCTATTATCGGCACCATTTAAATCAATAAGTTACCTAGCATTTAAGTAAACTACGTTCT 21108 ||||||||||| ||||||| ||||||| ||||||| |||||| || || ||||| | Sbjct 1270 TCCTATTATCG-CACCATTAAAATCAAAGAGTTACCCCATATTTAAATACACCACGTT-T 1327 Query 21109 CCTCTTGTGCCGTATTTGTGCCATTG 21134 |||| ||||||||||||||||||||| Sbjct 1328 CCTCCTGTGCCGTATTTGTGCCATTG 1353 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 117174976618532