Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20deminutivum_20[genbank_20GCA_5F900092275.1_202017- 01-02] 13,382 sequences; 45,801,537 total letters Query= NC_018857.1 Length=158305 Score E Sequences producing significant alignments: (Bits) Value seq232 111 2e-19 >seq232 Length=384298 Score = 111 bits (122), Expect = 2e-19 Identities = 214/310 (69%), Gaps = 8/310 (3%) Strand=Plus/Plus Query 6286 GTTCCAGAACTAGTTAAATGGTTATTACATGATTTCTCAATGCGCGGTATGGGTTC-ATT 6344 ||||||||| | || | ||| ||| |||||||||||| | || |||||| ||| Sbjct 85283 GTTCCAGAATTTGTAGACTGGCAGGCACACGATTTCTCAATGAGAGGAATGGGTGGTATT 85342 Query 6345 ACAGACTACAGAGAAATCTGGTTCTGGTCACTTATTATCATTCGTTGGTACTGACAGCAT 6404 || | | || |||| |||| || ||||| || || |||| | ||| Sbjct 85343 GAAG-CAGCGCTGACTTCTGCAGCTGGACATTTATTGAGTTTTACAGGATCTGATACCAT 85401 Query 6405 TCCAGCTATCGTGTATTTAGAAAAATACTATAAAGCTAATGTTGAAACAGAATTAGTAGC 6464 ||| || |||| | |||||| |||| ||||| || ||| || | |||||| || || Sbjct 85402 TCCGGCGATCGATTTCTTAGAAGAATATTATAACGCCAATTCAGACAAAGAATTGGTGGC 85461 Query 6465 AGGTTCTGTAAGCGCGACTGAACATAGTGTTATGTGCGCATCAGCAGGTGAAGACTTAGA 6524 |||||| || || || |||||| ||| |||||| || | | | | || || Sbjct 85462 AGGTTCAGTCGCTGCAACAGAACATTCTGTAATGTGC--ATGGGAACGACA-GA---AGG 85515 Query 6525 TGAGTACGAAACATTCAAACGATTAATTACAGAAGTATACCCTACTGGTATTGTAAGTAT 6584 |||||||||||| |||||| |||||||||||||||| || || | || ||||| ||| Sbjct 85516 TGAGTACGAAACCTTCAAAAGATTAATTACAGAAGTTTATCCAAAAGGAATTGTTTCTAT 85575 Query 6585 CGTATCTGAT 6594 ||| |||||| Sbjct 85576 CGTTTCTGAT 85585 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 506363283910800