Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20deminutivum_20[genbank_20GCA_5F900092275.1_202017- 01-02] 13,382 sequences; 45,801,537 total letters Query= NC_019448.1 Length=139806 Score E Sequences producing significant alignments: (Bits) Value seq232 190 2e-43 >seq232 Length=384298 Score = 190 bits (210), Expect = 2e-43 Identities = 429/637 (67%), Gaps = 21/637 (3%) Strand=Plus/Plus Query 134927 CAGCAGGACATGCAATTAGTTTTAAAGGTAGTGACACTGTACCTGTAGTAGACTTTTTAG 134986 |||| |||||| | | ||||||| ||| ||| || | || | | || || |||| Sbjct 85362 CAGCTGGACATTTATTGAGTTTTACAGGATCTGATACCATTCCGGCGATCGATTTCTTAG 85421 Query 134987 AATCTTACTACAATGCAGATGTAGAAAAAGAAATGGTTGTTGCTTCCATCCCTGCTACTG 135046 || || || || || || ||| |||||| |||| | | ||| || |||| || | Sbjct 85422 AAGAATATTATAACGCCAATTCAGACAAAGAATTGGTGGCAGGTTCAGTCGCTGCAACAG 85481 Query 135047 AACATTCGGTTATGTGTGCAAATGGTGATTACGAGACAATGGATGAATATGAAACATACA 135106 ||||||| || ||||| |||| || |||| | || | ||| || ||||| | || Sbjct 85482 AACATTCTGTAATGTGC----ATGG-GA--ACGACAGAAGG--TGAGTACGAAACCTTCA 85532 Query 135107 AACGTATGTTAACAGAAATTTATCCAACAGGAGTATTCTCTATTGTATCTGATACTTGGG 135166 || | | | |||||| ||||||||| |||| | | ||||| || ||||||||||||| Sbjct 85533 AAAGATTAATTACAGAAGTTTATCCAAAAGGAATTGTTTCTATCGTTTCTGATACTTGGG 85592 Query 135167 ACTTTTGGGGTAATATGACTAAAACTTTACCT----AGGTTAAAAGATATTATTATGGAA 135222 | || ||| | | | ||| | |||||| || |||||||| ||| | Sbjct 85593 ATTTATGGAA-AGTTT---TAACAGATTACCTCCCAAGATTAAAAGAAGATATCGTTTCT 85648 Query 135223 CGTGACGGTAAAGTAGTAATCAGACCTGATAGTGGAGACCCTGTTAAGATTATTTGTGGT 135282 | || || ||||| || || | ||||| ||||| || || || ||||| || || Sbjct 85649 AGAGAAGGAAAAGTGGTTATTCGTCCTGACAGTGGTGATCCAATTTTAATTATCTGCGGA 85708 Query 135283 GACCCTGATGCAGATACTGAGTATGAACGTAAAGGTGCTGTAGAAGTACTTTGGGATACT 135342 | ||||| | | | || || | || ||||| | | | ||| | ||||||||| | Sbjct 85709 AATCCTGACGGAAAAACAGAACAAGAGAAAAAAGGAGTTATCGAATTGCTTTGGGATGTT 85768 Query 135343 TTTGGAGGTACTGAAACTGAAAAAGGATATAAAGTACTAGATGAACATGTAGGATTAATC 135402 ||||| || || || || ||||| | |||| | | | | ||| | ||| ||| Sbjct 85769 TTTGGTGGAACGACAAACGATAAAGGTTTCAAAGAATTGGTTCCACAAATCGGAGCAATT 85828 Query 135403 TATGGTGATTCTATTAACTATGAGCGTGCTCAGC--AAATTTGTGAGGGATTAAAAGCAA 135460 ||||| ||| ||||| | ||| | || | |||| || ||| |||||||||| | Sbjct 85829 TATGGCGATAGTATTACCGT--AGCAAGAGCAACTGAAATCTGCGAGAGATTAAAAGCGA 85886 Query 135461 AAGGTTTTGCAAGTATTAACGTTGTATTAGGTGTAGGTAGTTTCTCTTATCAATTTAATA 135520 |||||||||| || ||||| || ||||| | || |||| | ||||||| |||| Sbjct 85887 AAGGTTTTGCTTCTACAAACGTGGTTTTAGGAATTGGATCTTTCACGTATCAATACAATA 85946 Query 135521 CTCGTGATACTCATGGGTTTGCAATCAAAGCAACATA 135557 | ||||||||| ||| |||||||| |||||||| || Sbjct 85947 CACGTGATACTTTTGGTTTTGCAATGAAAGCAACTTA 85983 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 447176386055520