Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20deminutivum_20[genbank_20GCA_5F900092275.1_202017- 01-02] 13,382 sequences; 45,801,537 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq32 237 3e-57 >seq32 Length=13759 Score = 237 bits (262), Expect = 3e-57 Identities = 863/1325 (65%), Gaps = 58/1325 (4%) Strand=Plus/Plus Query 212948 GTAAAAGTTTGAAGTGTAGGGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCT 213007 ||| | ||| || ||||| ||||||| || ||||||||| || || ||||| | || Sbjct 3133 GTAGATGTTGGAGGTGTATGGCTCGAAGCACTCGTTGTTGCCGAGGATCTGCGAGGTTGA 3192 Query 213008 GGCTGTGGGCATGGGAGCCACCAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGAGGCG 213067 ||| ||||||||||| || | || | ||| | | |||| || | ||||| | Sbjct 3193 GGCAGTGGGCATGGGGGCAATGAGCAAGGAGTTGCGGAGACCGTTCTTGACGATGTTGGC 3252 Query 213068 CCGAAGCTCTGCCCAGTCCCATCTGCCAGACAGGTCCTCGTCCTTCACGTTCCACATGTC 213127 | || | | ||||||||| | || || | | | | ||||||||| Sbjct 3253 CTTGAGACCAGTCCAGTCCCAACGAGGGGAGGGGACGACACC------GGGCCACATGTC 3306 Query 213128 AAACTGCAAGATGCCTTTGCTCACGGGGCTGC-CCTGGTAAGAGGAG-TAGGGGCCATGC 213185 | || | ||| || ||| |||| || || || ||| |||| || ||| Sbjct 3307 GTATTGGAGGATACCCTTGGAGGCGGG--TGATCCAGGGAAGCTCTCATAGGAACCTTGC 3364 Query 213186 TCCTTGGCCAGCTCGCAGGACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCC 213245 || |||| |||| ||||| ||||| || |||| ||||| ||| |||||| Sbjct 3365 TCGACAGCCATCTCGTTGGACGAGGTGAGGGCGGCAAAGTATATGGTCTCAGCAATCTCC 3424 Query 213246 CTGTTGAG--CTTCTTGGCCTCTGGGGACGTGAAGGGCATCATCATG-CGTTGGAACACA 213302 ||||||| || | ||| | | || ||||||| || | || || || ||| Sbjct 3425 TTGTTGAGGACTGCAGCGCCAGCAGAGTCG--AAGGGCAAACGCAAGGCGATG-AAGACA 3481 Query 213303 TCAGCCAGCCCCTGGACCCCGATGCCGATGGGTCTGTGTCTCAGGTTAGA-CTTGGAGCA 213361 ||||| || || |||| || || |||||||| | ||| | || ||| || | |||| Sbjct 3482 TCAGCGAGACCTTGGATTCCAATACCGATGGGACGGTGACGCATGTTGGAGCGACGAGC- 3540 Query 213362 CTCCTCCAAGGGGTAAAAGTTGCAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTT 213421 |||||| | |||||| |||||| ||||||||||||||||||||| | |||| || || Sbjct 3541 CTCCTCGACGGGGTAGTAGTTGCGGTCGATGATCTTGTTGAGGTTTCTGGTGATGACCTT 3600 Query 213422 GGTGACATGGGCCAGGTACTCGTGATTGAA-----------CAC---GTAGCCC-CCGTC 213466 | |||| | || || | ||| | ||| ||| || || || || Sbjct 3601 GACCACATCGAACAAGTGTTGGTGGTCGAAGTAGGCGGGCTCACCTGGTTGCTTGCCCTC 3660 Query 213467 CTGCACAAACTCAGGCAGGGCGATGCTGGCCAGGTTGCAAACGGCCACCTCCTGAGAGTC 213526 || ||| ||| ||||||||||| ||||| ||||||||| || ||||||| | Sbjct 3661 CTTGACATACTTGGGCAGGGCGATCGAGGCCAAGTTGCAAACAGCAACCTCCTCTGGTGA 3720 Query 213527 TGTGTACTCCATGATCTCGGTGCACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTG 213586 ||||| | |||||||| ||||||| |||| |||| ||||||||| ||||| || || Sbjct 3721 AGTGTATTGGATGATCTCAGTGCACAAGTTGGAGCATGAGATGGTGCCGAGGTTTTGTTG 3780 Query 213587 GTTTGACTTTGCGTTGGCAGAATCCTTGTAGAGCATGTAGGGGGACCCGGTCTCTAGCTG 213646 ||| ||||| || ||| | ||||||||| | |||||||| | || ||||| | ||| Sbjct 3781 GTTGGACTTGGCATTGCATGCATCCTTGTACAAGATGTAGGGAGTACCAGTCTCGATCTG 3840 Query 213647 GGACACCAGTATCTGGCTCCAGAGGTACCTG-GCCTTGACCACCCGCCTGACAGCTCCGG 213705 |||| | | || | ||| || | | || |||||||||||| | | | || | Sbjct 3841 GGACTCGATGATGGCGAACCAAAGAT-CTTGAGCCTTGACCACCTTGCGGGGAAGACCTG 3899 Query 213706 GCGTAGCCTCGTACTGTTCGTAGAGCTCGTTGAATTCGTGGCCCCAGACCCTGT---CCA 213762 | || |||||||||| ||| | |||||||| || ||||| | | ||| | | Sbjct 3900 GGGTGGCCTCGTACTTCAAGTACAAGTCGTTGAACTCTTGGCC---GTACTTGTCAGCGA 3956 Query 213763 GTCCC--GGACAGGATGCGGGACACATGAGGCTCCAGTCCCCGTCAT--CTCT-GACTCT 213817 | ||| || | | || || | | | | || ||| ||| |||| | || || | Sbjct 3957 GACCCTTGGCCTCGTTGGGGCAGA-ACAATGC-CCACTCC---TCATTGCGCTCAACACG 4011 Query 213818 CTGCATGAACAGGTCCGGGACCCACAGCGCGGTGAACAGGTCCCTGGTCCTCCTCTCGTC 213877 || |||||| || || || | ||| || || ||||| ||| | | | | |||| || Sbjct 4012 CTCCATGAAGAGATCTGGAATCCAGAGGGCATAGAACAAGTCACGAGCACGCATCTCCTC 4071 Query 213878 CACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAAAGATGTCCGCGTGCCACGGCTCCAT 213937 | || ||| ||||| || || || || ||||||| ||| |||||||| ||||| | Sbjct 4072 CTTGCCGTGGTTCTTGCGGAGGTCGAGGAACTCAAAGACGTCGGCGTGCCATGGCTCGAG 4131 Query 213938 GTAGATGGCAAAGGCGCCCGGCCTCTT---GCCGCCCTGGTCCAC-CAGCCTGGCCACCA 213993 ||||| ||||| || ||| | ||| ||| || ||||| || ||| || || Sbjct 4132 GTAGACTGCAAATGCACCCTTGCGCTTTCCGCCACCTTGGTCGACATAGC--GGGCAGTG 4189 Query 213994 T-GTTGAAGATGCGCAGGACGGGTACCAGCCCGTTGGACTGTCCGTTGGTTCCCGCTATA 214052 | |||||| | || || | ||| || || |||||||| |||||||| || || Sbjct 4190 TCGTTGAACACACGGAGCATGGGGACTAGACCGTTGGAGGTGCCGTTGGTGCCGCGGATG 4249 Query 214053 TACGAGCCGGAGGCCCTCAGGTTGCTCATGGAGAGCCCTATGCCACCGGCGTACTTGGAG 214112 || |||| || || | | ||| || | | || ||||| || || |||||||| Sbjct 4250 TAGGAGCGGGCAGCACGGATCTTGTGCACAGCAATGCCAATGCCTCCAGCAGACTTGGAG 4309 Query 214113 ATCATGGCGCAGCGCCTCACAGTCTCCATGATGCCGGCCATGCTGTCATCTGTGAGGTTC 214172 || | || || || | | || || ||| || | ||| ||| || | | | Sbjct 4310 ATGAGAGCACATTGCTTGAGTGTGTCGTAGATACCCTCGATGGAGTCGTCCTTCATTTGG 4369 Query 214173 AGCAAGAAGCAGCTCGAGAGCTGGGGCCTGGACGAGCCAGAGTTGAAAAGCGTGGGGCTG 214232 | | ||||||| || | |||||| || | ||||| ||||| || ||||| || Sbjct 4370 ACGAGGAAGCAGGAGGACATCTGGGGATAGGGGGTGCCAGCATTGAACAGGGTGGGAGTG 4429 Query 214233 GCATG 214237 ||||| Sbjct 4430 GCATG 4434 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931376977850880