Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20deminutivum_20[genbank_20GCA_5F900092275.1_202017- 01-02] 13,382 sequences; 45,801,537 total letters Query= NC_019527.1 Length=43551 Score E Sequences producing significant alignments: (Bits) Value seq2271 93.3 1e-14 >seq2271 Length=37941 Score = 93.3 bits (102), Expect = 1e-14 Identities = 97/125 (78%), Gaps = 2/125 (2%) Strand=Plus/Plus Query 18794 CGACTGGTCGAGATTGACCAAATGGACGTGCTGGACATCCTGAAAGAGGATGGGGCACTC 18853 || ||||| || |||||||| |||||||||||||| |||||||| || || || | | Sbjct 20252 CGCCTGGTTGAAATTGACCAGATGGACGTGCTGGATATCCTGAACGACGACGGCGGGATG 20311 Query 18854 AAGCCGATCAGCGAGTGGCC-AAAGTGCTGGCGAACCACATTGAGCGGGCTGGACATCAA 18912 ||||||||| || ||||| ||||| |||||| ||| || | |||| | |||| ||| Sbjct 20312 AAGCCGATCGCTGAATGGCCGAAAGT-CTGGCGTACCTCACTAAGCGCGATGGATATCGC 20370 Query 18913 TACCA 18917 ||||| Sbjct 20371 TACCA 20375 Score = 82.4 bits (90), Expect = 2e-11 Identities = 69/85 (81%), Gaps = 0/85 (0%) Strand=Plus/Plus Query 18953 ATCCTCAAGAAGATCAAGTGGCCGGACAAGGTGAAGAACCTAGAGCTTATCGGCAAGCAT 19012 ||||| |||||| | |||||||||||||||||||||||||| || || || || ||||| Sbjct 20447 ATCCTGAAGAAGGTAAAGTGGCCGGACAAGGTGAAGAACCTCGAACTGATTGGTAAGCAC 20506 Query 19013 GTCCGCGTCGGGGCATTCAAAGAGC 19037 ||| ||| || |||||||||| Sbjct 20507 GTCGACGTTAACGCGTTCAAAGAGC 20531 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 139219472943292