Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20deminutivum_20[genbank_20GCA_5F900092275.1_202017- 01-02] 13,382 sequences; 45,801,537 total letters Query= NC_019545.1 Length=47355 Score E Sequences producing significant alignments: (Bits) Value seq2271 136 1e-27 seq10411 96.9 1e-15 >seq2271 Length=37941 Score = 136 bits (150), Expect = 1e-27 Identities = 140/183 (77%), Gaps = 0/183 (0%) Strand=Plus/Plus Query 30133 ACTGCGTTGACCAGTTGTGCCTCGTAACCAAGAACACCGTTAACCAGGTGTGTTTTCTGA 30192 || ||||| ||||| || || || |||||||| |||||||||| ||||||||||| Sbjct 11626 ACCGCGTTTACCAGCTGCGCTTCATAACCAAGCGTGCCGTTAACCACATGTGTTTTCTGC 11685 Query 30193 GCCACAGCGTAAGGGTTCATGCCCCATTGCATAGCCTGCATGACGATAGCCATACAGTCG 30252 ||||||||| | |||||||||||||| ||| ||||||||| | ||||| ||||| Sbjct 11686 GCCACAGCGAACGGGTTCATGCCCCACTGCGCCGCCTGCATGGTCACAGCCAGGCAGTCA 11745 Query 30253 GCTGGTTTCCCTGCAAGGTGTGCCGGTACCGTCACCTGTGAGTCTGCCATCAGGTTAGCG 30312 || || || ||||| ||||| || || || || ||| ||| ||||||||| | ||| Sbjct 11746 GCAGGCTTTCCTGCCAGGTGCGCAGGAACGGTGGCCTTACTGTCAGCCATCAGGGTTGCG 11805 Query 30313 AAA 30315 ||| Sbjct 11806 AAA 11808 >seq10411 Length=590 Score = 96.9 bits (106), Expect = 1e-15 Identities = 134/185 (72%), Gaps = 4/185 (2%) Strand=Plus/Plus Query 47077 GCGTTGTATCGTCGCAGTANNNNNNNATTAACAATGACCGCAGCCCTTAATGGGAGCTCC 47136 ||| ||||||||||| ||| |||||| ||||||| ||||| | |||| ||| Sbjct 332 GCGCTGTATCGTCGCCGTATTCCCGCATTAACCATGACCGTAGCCCG-ACGGGGAATTCC 390 Query 47137 TTCTGCGTGAGTGTGCAATGATAATCAATAACGATGCATACCGGGGTTTGCAGCTTTTTC 47196 |||||||||||||||| |||||||| ||||||||| |||||| ||| | | | | Sbjct 391 TTCTGCGTGAGTGTGCGGGAATAATCAAAAACGATGCACACCGGGTTTTACTGTGCTGAC 450 Query 47197 GATGGCTGGTTTATCCCTCATTGCTCGCCATCTCGATGCGGGGGTAGAAGAAATCGAGAG 47256 || || ||| ||||||| | |||| | || |||| ||| ||||||| || || Sbjct 451 AGACGCAGGGTTA-CCCTCATAG-TCGCTTTTCCGGTGCGATGGTGGAAGAAACCGGGA- 507 Query 47257 TGTTT 47261 ||||| Sbjct 508 TGTTT 512 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 151390338548428