Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20deminutivum_20[genbank_20GCA_5F900092275.1_202017- 01-02] 13,382 sequences; 45,801,537 total letters Query= NC_019710.1 Length=40710 Score E Sequences producing significant alignments: (Bits) Value seq4011 1918 0.0 seq2342 412 9e-111 seq3951 197 4e-46 seq4422 145 2e-30 >seq4011 Length=1784 Score = 1918 bits (2126), Expect = 0.0 Identities = 1163/1225 (95%), Gaps = 6/1225 (0%) Strand=Plus/Minus Query 32636 ACACAAAAGACA--CTAATACaaaagaaaaaagaaaaGATTATTCGTCAGAGAATTCTGG 32693 |||||||||||| |||| ||||||| || | |||| || |||||| |||||||||| Sbjct 1222 ACACAAAAGACAAACTAA--CAAAAGACAATATAAAACCTTTTTCGTCCGAGAATTCTGA 1165 Query 32694 CGAATCCTCTGACCAGCCAGAAAACGATCTTTCTGTGGTTAAACCGGATGCTGCAATTCA 32753 ||||||||||||||||||||||||||||||| ||||| | |||||||||||||||||||| Sbjct 1164 CGAATCCTCTGACCAGCCAGAAAACGATCTTCCTGTGATGAAACCGGATGCTGCAATTCA 1105 Query 32754 GAGCGGCAGCAAGTGGGGAACAGCAGAAGACCTGACCGCCGCAGAGTGGATGTTTGACAT 32813 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 1104 GAGCGGCAGCAAGTGGGGGACAGCAGAAGACCTGACCGCCGCAGAGTGGATGTTTGACAT 1045 Query 32814 GGTGAAGACTATCGCACCATCAGCCAGAAAACCGAATTTTGCTGGGTGGGCTAACGATAT 32873 ||||||||| ||||| |||||||||||||||||||||||||| ||||||||||||||||| Sbjct 1044 GGTGAAGACCATCGCGCCATCAGCCAGAAAACCGAATTTTGCAGGGTGGGCTAACGATAT 985 Query 32874 CCGCCTGATGCGTGAACGTGACGGACGTAACCATCGCGACATGTGTGTACTGTTCCGCTG 32933 ||||||||||||||||||||| ||||||||||| ||||||||||| || ||||||||||| Sbjct 984 CCGCCTGATGCGTGAACGTGATGGACGTAACCACCGCGACATGTGCGTGCTGTTCCGCTG 925 Query 32934 GGCATGCCAGGACAACTTCTGGTCCGGTAACGTTCTTAGCCCGGCCAAACTCCGCGACAA 32993 ||||||||||||||||||||||||||||||||| || || ||||| |||||||||||||| Sbjct 924 GGCATGCCAGGACAACTTCTGGTCCGGTAACGTGCTGAGTCCGGCTAAACTCCGCGACAA 865 Query 32994 GTGGACCCAGCTCGAAATCAACCGTAACAAGCAACAGGCAGTCGTGACAGCCAGCAAACC 33053 ||||||||||||||||||||||||||||||||||||||| | |||||||||||| ||||| Sbjct 864 GTGGACCCAGCTCGAAATCAACCGTAACAAGCAACAGGCTGGCGTGACAGCCAGAAAACC 805 Query 33054 AAAACTCGACCTGACAAACACAGACTGGATTTACGGGGTGGATCTATGAAAAACATCGCC 33113 ||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||| Sbjct 804 AAAACTCGACCTGACAAACACTGACTGGATTTACGGGGTGGATTTATGAAAAACATCGCC 745 Query 33114 GCACAGATGGTTAACTTTGACCGTGAGCAGATGCGTCGGATCGCCAACAACATGCCGGAA 33173 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 744 GCACAGATGGTTAACTTTGACCGTGAGCAGATGCGTCGGATCGCCAACAACATGCCGGAA 685 Query 33174 CAGTACGACGAAAAGCCGCAGGTACAGCAGGTAGCGCAGATCATCAACGGTGTGTTCAGC 33233 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 684 CAGTACGACGAAAAGCCGCAGGTACAACAGGTAGCGCAGATCATCAACGGTGTGTTCAGC 625 Query 33234 CAGTTACTGGCAACTTTCCCGGCGAGCCTGGCTAACCGTGACCAGAACGAACTGAACGAA 33293 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 624 CAGTTACTGGCAACTTTCCCGGCGAGCCTGGCTAACCGTGACCAGAATGAACTGAACGAA 565 Query 33294 ATCCGCCGCCAGTGGGTTCTGGCTTTCCGGGAAAACGGGATCACCACAATGGAACAGGTT 33353 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 564 ATCCGCCGCCAGTGGGTTCTGGCTTTCCGGGAAAACGGGATCACCACAATGGAACAGGTT 505 Query 33354 AACGCAGGAATGCGCGTAGCCCGTCGGCAGAATCGACCATTTCTGCCATCACCCGGGCAG 33413 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 504 AACGCAGGAATGCGCGTAGCCCGTCGGCAGAATCGACCATTCCTGCCATCACCCGGGCAG 445 Query 33414 TTTGTTGCATGGTGCCGGGAAGAAGCATCCGTTATCGCCGGACTGCCAAACGTCAGCGAG 33473 ||||| || ||||||||||||||||||||||||| |||||| |||||||||||||||||| Sbjct 444 TTTGTCGCCTGGTGCCGGGAAGAAGCATCCGTTAACGCCGGGCTGCCAAACGTCAGCGAG 385 Query 33474 CTGGTTGATATGGTTTACGAGTATTGCCGGAAGCGAGGCCTGTATCCGGATGCGGAGTCT 33533 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| Sbjct 384 CTGGTTGATATGGTTTACGAGTATTGCCGGAAGCGTGGCCTGTATCCGGATGCAGAGTCT 325 Query 33534 TATCCGTGGAAATCAAACGCGCACTACTGGCTGGTTACCAACCTGTATCAGAACATGCGG 33593 |||||||||||||| |||||||| ||||||||||||||||||||||| |||||||||||| Sbjct 324 TATCCGTGGAAATCGAACGCGCATTACTGGCTGGTTACCAACCTGTACCAGAACATGCGG 265 Query 33594 GCCAATGCGCTTACTGATGCGGAATTACGCCGTAAGGCCGCAGATGAGCTTGTCCA-TAT 33652 ||||||||||||||||||||||||||||| || ||||| || ||||| || |||| ||| Sbjct 264 GCCAATGCGCTTACTGATGCGGAATTACGGCGCAAGGCTGCCGATGAACT-GTCCTGTAT 206 Query 33653 GACTGCGAGAATTAACCGTGGTGAGGCGATCCCTGAACCAGTAAAACAACTTCCTGTCAT 33712 ||| ||| |||||||||||||||||||||| ||||||||||||||||| ||||||||||| Sbjct 205 GACCGCGCGAATTAACCGTGGTGAGGCGATACCTGAACCAGTAAAACAGCTTCCTGTCAT 146 Query 33713 GGGCGGTAGACCTCTAAATCGTGCACAGGCTCTGGCGAAGATCGCAGAAATCAAAGCTAA 33772 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 145 GGGCGGTAGACCTCTAAATCGTGCACAGGCTCTGGCGAAGATCGCAGAAATCAAAGCTAA 86 Query 33773 GTTCGGACTGAAAGGAGCAAGTGTATGACGGGCAAAGAGGCAATTATTCATTACCTGGGG 33832 ||| || ||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 85 GTTTGGGCTGAAAGGAGCAAGTGTATGACGGGCAAAGAGGCAATTATTTATTACCTGGGG 26 Query 33833 ACGCATAATAGCTTCTGTGCGCCGG 33857 |||||||| || |||||||||| || Sbjct 25 ACGCATAAGAGTTTCTGTGCGCAGG 1 >seq2342 Length=4104 Score = 412 bits (456), Expect = 9e-111 Identities = 246/258 (95%), Gaps = 0/258 (0%) Strand=Plus/Plus Query 22734 CAGGCAAAAAGAAACCGCCATCAGGCGGCTTGGTGTTCTTTCAGTTCTTCAATTCGAATA 22793 || |||| || ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1784 CACGCAAGAAAAAACCGCCATCAGGCGGCTTGGTGTTCTTTCAGTTCTTCAATTCGAATA 1843 Query 22794 TTGGTTACGTCTGCATGTGCTATCTGCGCCCATATCATCCAGTGGTCATAGCAGTCGTTG 22853 |||||||||||||||||||||||||||||||| | |||||||||||||||||||||| || Sbjct 1844 TTGGTTACGTCTGCATGTGCTATCTGCGCCCACAGCATCCAGTGGTCATAGCAGTCGCTG 1903 Query 22854 ATGTTCTCCGCTTCGATAACTCTGTTGAATGGCTCTCCATTCCATTCACCTGTGACTCGG 22913 |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 1904 ATGTTCTCGGCTTCGATAACTCTGTTGAATGGTTCTCCATTCCATTCACCTGTGACTCGG 1963 Query 22914 AAGTGCATTTATCATCTCCATAAAACAAAACTCGCCGTAGCGAGTTCAGATAAAAGAAAT 22973 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 1964 AAGTGCATTTATCATCTCCATAAAACAAAACCCGCCGTAGCGAGTTCAGATAAAAGAAAT 2023 Query 22974 CCCCGAGAGTGCGAGGAT 22991 || || ||||||||||| Sbjct 2024 CCTCGTCAGTGCGAGGAT 2041 >seq3951 Length=514 Score = 197 bits (218), Expect = 4e-46 Identities = 114/117 (97%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 38854 ATGAGCAGAGTAACCGCGATTATCTCCGCTCTGGTTATCTGCATCATCGTTTGCCTGTCA 38913 |||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 352 ATGAACAGAGTAACCGCGATTATCTCCGCTCTGGTTATCTGCATCATCGTCTGCCTGTCA 411 Query 38914 TGGGCTGTTAATCATTACCGTGATAACGCCATTACCTACAAAGCCCAGCGCGATAAA 38970 ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 412 TGGGCTGTTAATCATTACCGTGATAACGCCATTACCTACAAAGCCCAGCGCGACAAA 468 >seq4422 Length=2403 Score = 145 bits (160), Expect = 2e-30 Identities = 154/199 (77%), Gaps = 3/199 (2%) Strand=Plus/Plus Query 33845 TTCTGTGCGCCGGACGTTGCCGCGCTAACAGGCGCAACAGTAACCAGCATAAATCAGGCC 33904 |||||||||| ||||||||| ||| |||||| | ||||||||| ||||||||||||| Sbjct 1 TTCTGTGCGCAGGACGTTGCTGCGGCAACAGGTGTGACAGTAACCTGCATAAATCAGGCA 60 Query 33905 GCGGCTAAAATGGCACGGGCAGGTCTTCTGGTTATCGAAGGTAAGGTCTGGCGAACGGTG 33964 || ||||||||||| || ||||| | ||||| || || |||||||||||||||||| | Sbjct 61 GCAGCTAAAATGGCGCGTGCAGGAATCCTGGTCATTGATGGTAAGGTCTGGCGAACGTTT 120 Query 33965 TATTACCGGTTTGCTACCAGGGAAGA-ACGGGAAGGAAAGATGAGCACGAACCTGGTTTT 34023 ||| ||||| ||||| ||| || | || || ||| |||| | ||| | || ||| Sbjct 121 GTTTAACGGTTAGCTACTCAGGATGATAGGGCGCGGCAAG-TGAGTATGAAGC-GGATTT 178 Query 34024 TAAGGAGTGTCGCCAGAGT 34042 | |||| || | |||||| Sbjct 179 TCAGGAATGCCATCAGAGT 197 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 130129717637248