Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20deminutivum_20[genbank_20GCA_5F900092275.1_202017- 01-02] 13,382 sequences; 45,801,537 total letters Query= NC_019715.1 Length=39578 Score E Sequences producing significant alignments: (Bits) Value seq3951 187 6e-43 seq2342 100 7e-17 >seq3951 Length=514 Score = 187 bits (206), Expect = 6e-43 Identities = 111/116 (96%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 36823 ATGAGCAGAGTAACCGCGATTATCTCCGCTCTGGTTATCTGCATCATCGTCTGCCTGTCA 36882 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 352 ATGAACAGAGTAACCGCGATTATCTCCGCTCTGGTTATCTGCATCATCGTCTGCCTGTCA 411 Query 36883 TGGGCGGTTAATCATTACCGTGATAACGCCATTACCTACAAAGAGCAGCGCGATAA 36938 ||||| ||||||||||||||||||||||||||||||||||||| |||||||| || Sbjct 412 TGGGCTGTTAATCATTACCGTGATAACGCCATTACCTACAAAGCCCAGCGCGACAA 467 >seq2342 Length=4104 Score = 100 bits (110), Expect = 7e-17 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 23097 CATTTCTTGTCTCCATAAAACAAAACTCGCCGTAGCGAGTTCAGATAAAAGAAATCCCCG 23156 ||||| | ||||||||||||||||| |||||||||||||||||||||||||||||| || Sbjct 1969 CATTTATCATCTCCATAAAACAAAACCCGCCGTAGCGAGTTCAGATAAAAGAAATCCTCG 2028 Query 23157 CGAGTGCGAGGAT 23169 ||||||||||| Sbjct 2029 TCAGTGCGAGGAT 2041 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 126507893277360