Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20deminutivum_20[genbank_20GCA_5F900092275.1_202017- 01-02] 13,382 sequences; 45,801,537 total letters Query= NC_019719.1 Length=41528 Score E Sequences producing significant alignments: (Bits) Value seq2342 129 2e-25 >seq2342 Length=4104 Score = 129 bits (142), Expect = 2e-25 Identities = 79/84 (94%), Gaps = 0/84 (0%) Strand=Plus/Plus Query 20856 TTGCTCCACCTTTTCATCAACCCAATCCGCCCACCACTGCATCATTTCTCTGCGCTTATC 20915 || |||||| |||||||||| |||||||| |||||||||||||||||||||||||||||| Sbjct 116 TTACTCCACTTTTTCATCAAGCCAATCCGTCCACCACTGCATCATTTCTCTGCGCTTATC 175 Query 20916 GAGATACTGAGCATGGTTGTAAAT 20939 |||||||||||| ||||||||||| Sbjct 176 GAGATACTGAGCGTGGTTGTAAAT 199 Score = 114 bits (126), Expect = 3e-21 Identities = 66/68 (97%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 22501 CAGGCAATAAAAAACCGCCATCAGGCGGCTTGGTGTTCTTTCAGTTCTTCAATTCGAATA 22560 || |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1784 CACGCAAGAAAAAACCGCCATCAGGCGGCTTGGTGTTCTTTCAGTTCTTCAATTCGAATA 1843 Query 22561 TTGGTTAC 22568 |||||||| Sbjct 1844 TTGGTTAC 1851 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 132746901671160