Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20deminutivum_20[genbank_20GCA_5F900092275.1_202017- 01-02] 13,382 sequences; 45,801,537 total letters Query= NC_019768.1 Length=41468 Score E Sequences producing significant alignments: (Bits) Value seq2342 3061 0.0 >seq2342 Length=4104 Score = 3061 bits (3394), Expect = 0.0 Identities = 1768/1814 (97%), Gaps = 1/1814 (0%) Strand=Plus/Plus Query 21215 GTTTGATGACAAAAAATTAGCGCAAGAGGACAACAAA-TCACCTTGCGCTAATGCTCTGC 21273 || || ||||||||||||||||||||| ||||| ||| ||||||||||||||||||||| Sbjct 212 GTGTGTTGACAAAAAATTAGCGCAAGAAGACAAAAAAATCACCTTGCGCTAATGCTCTGT 271 Query 21274 TACAGGTCACTAATACTATCTAAGTAGTTGATTCATAGTGACTGGATATGTTGTGTTTTG 21333 |||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| Sbjct 272 TACAGGTCACTAATACCATCTAAGTGGTTGATTCATAGTGACTGGATATGTTGTGTTTTG 331 Query 21334 TCGCATTATGTAGTCTATTTTTTAGACTAAATATATTGTAATGCATTGATATTAATGGTT 21393 | |||||||| ||||||||||||||||| ||| ||| ||| | ||||||||||| ||| Sbjct 332 TAGCATTATGCAGTCTATTTTTTAGACTGAATCAATTATAAGCCGTTGATATTAATTGTT 391 Query 21394 TTTAATGTTTCACGTTCAGCTTTTTTATACTAAGTTGGCATTATAAAAAAGCATTGCTTA 21453 |||| ||||||| |||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 392 TTTACCGTTTCACATTCAACTTTTTTATACTAAGTTGGCATTATAAAAAAGCATTGCTTA 451 Query 21454 TCAATTTGTTGCAACGAACAGGTCACTATCAGTCAAAATAAAATCATTATTTGATTTCAA 21513 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 452 TCAATTTGTTGCAACGAACAGGTCACTATCAGTCAAAATAAAATCATTATTTGATTTCAA 511 Query 21514 TTTTGTCCCACTCCCTGCCTCTGTCATCACGATACTGTGATGCCATGGTGTCCGACTTAT 21573 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 512 TTTTGTCCCACTCCCTGCCTCTGTCATCACGATACTGTGATGCCATGGTGTCCGACTTAT 571 Query 21574 GCCCGAGAAGATGTTGAGCAAACTTATCGCTTATCTGCTTCTCATAGAGTCTTGCAGACA 21633 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 572 GCCCGAGAAGATGTTGAGCAAATTTATCGCTTATCTGCTTCTCATAGAGTCTTGCAGACA 631 Query 21634 AACTGCGCAACTCGTGAAAGGTAGGCGGATCCCCTTCGAAGGAAAGACCTGATGCTTTTC 21693 |||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||| Sbjct 632 AACTGCGCAACTCGTGAAAGGTTGGCGGATCCCCTTCGAAGGAGAGACCTGATGCTTTTC 691 Query 21694 GTGCGCGCATAAAATACCTTGATACTGTGCCGGATGAAAGCGGTTCGCGACGAGTAGATG 21753 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 692 GTGCGCGCATAAAATACCTTGATACTGTGCCGGATGAAAGCGGTTCACGACGAGTAGATG 751 Query 21754 CAATTATGGTTTCTCCGCCAAGAATCTCTTTGCATTTATCAAGTGTTTCCTTCATTGATA 21813 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 752 CAATTATGGTTTCTCCGCCAAGAATCTTTTTGCATTTATCAAGTGTTTCCTTCATTGATA 811 Query 21814 TCCCGAGAGCATCAACATGCAATGTTGTAGGTATGGCAATTTTTACGCCTGTTTTGCTTT 21873 |||||||||||||||||||||||||||| || |||||||||||||||||||||||||||| Sbjct 812 TCCCGAGAGCATCAACATGCAATGTTGTTGGGATGGCAATTTTTACGCCTGTTTTGCTTT 871 Query 21874 GCTCGACATAAAGATAGCCATCTACGATATCAGACCACTTCATTTCGCATAAATCACCAA 21933 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 872 GCTCGACATAAAGATATCCATCTACGATATCAGACCACTTCATTTCGCATAAATCACCAA 931 Query 21934 CTCGTTGCCCGGTAACAACAGCCAGTTCCATTGCAAGTCTGAGCCAACATGGTGATGATT 21993 |||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 932 CTCGCTGCCCGGTAACAACAGCCAGTTCCATTGCAAGTCTAAGCCAACATGGTGATGATT 991 Query 21994 CTGCTGCTTGATAAATTTTCAGGTATTCGTCAGCTGTAAGTCTTGATCTCCTTACCTCTG 22053 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 992 CTGCTGCTTGATAAATTTTCAGGTATTCGTCAGCCGTAAGTCTTGATCTCCTTACCTCTG 1051 Query 22054 ATTTTGCTGCGCGAGTGGCAGCGACCGGGTTTGTTGTTATATGGCCTTCAGCTATTGCCT 22113 ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| |||| Sbjct 1052 ATTTTGCAGCGCGAGTGGCTGCGACCGGGTTTGTTGTTATATGGCCTTCAGCTATAGCCT 1111 Query 22114 CTCGGAATGCATCGCTCAGTGTTGATCTGATTAACTTGGCTGATGCCGCCTTGCCCTCGT 22173 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1112 CTCGGAATGCATCGCTCAGTGTTGATCTGATTAACTTGGCTGATGCCGCCTTGCCCTCGT 1171 Query 22174 CTATGTATCCATTGAGCATTGCCGCAATTTCTTTTGTGGTGATGTCTTCAAGTGGAGCAT 22233 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1172 CTATGTATCCATTGAGCATTGCCGCAATTTCTTTTGTGGTGATGTCTTCAAGTGGAGCAT 1231 Query 22234 CAGGCAGACCCCTCCTTATTGCTTTAATTTTGCTCATGTAATTTATGAGTGTCTTCTGCT 22293 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1232 CAGGCAGACCCCTCCTTATTGCTTTAATTTTGCTCATGTAATTTATGAGTGTCTTCTGCT 1291 Query 22294 TGATTCCTCTGCTGGCCAGGATTTTTTCGTAGCGATCAAGCCATGAATGTAACGTAACGG 22353 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1292 TGATTCCTCTGCTGGCCAGGATTTTTTCGTAGCGATCAAGCCATGAATGTAACGTAACGG 1351 Query 22354 AATTATCACTGTTGATTCTCGCTGTCAGAGGCTTGTGTTTGTGCCCTGAAAATAACTCAA 22413 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 1352 AATTATCACTGTTGATTCTCGCTGTCAGAGGCTTGTGTTTGTGTCCTGAAAATAACTCAA 1411 Query 22414 TGTTGGCCTGTATAGCTTCAGTGATTGCGATTCGCCTGTCTCGGCCTAATCCAAACTCTT 22473 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1412 TGTTGGCCTGTATAGCTTCAGTGATTGCGATTCGCCTGTCTCGGCCTAATCCAAACTCTT 1471 Query 22474 TACCCGTCCTTGGGTCCCTGTAGCAGTAATATCCATTGTTTCTTATATAAAGATTAGGGG 22533 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 1472 TACCCGTCCTTGGGTCCCTGTAGCAGTAATATCCATTGTTTCTTATATAAAGGTTAGGGG 1531 Query 22534 GTAAATCCCGGCGCTCATGACTTCGCCTTCTTCCCATTTCTGATCCTCTTCAAAAGGCTA 22593 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1532 GTAAATCCCGGCGCTCATGACTTCGCCTTCTTCCCATTTCTGATCCTCTTCAAAAGGCTA 1591 Query 22594 CCTGTTACTGGTCGATTTAAGTCAACCTTTACCGCTGATTCGTGGAACAGATACTCTCTT 22653 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1592 CCTGTTACTGGTCGATTTAAGTCAACCTTTACCGCTGATTCGTGGAACAGATACTCTCTT 1651 Query 22654 CCATCCTTAACCGGAGGTGGGAATATCCTGCACTCGCGTACCCATCGACGAACTGTTTCA 22713 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 1652 CCATCCTTAACCGGAGGAGGGAATATCCTGCACTCGCGTACCCATCGACGAACTGTTTCA 1711 Query 22714 AGGCTTCTTGGGCGTCGCTGGCGAGCGTTCCACTCCTGAAGTGTCAAGTACATCGCAAAG 22773 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 1712 AGGCTTCTTGGGCGTCGCTGGCGTGCGTTCCACTCCTGAAGTGTCAAGTACATCGCAAAG 1771 Query 22774 TCTCCGCAATTACACGCAAGAAAAAACCGCCATCAGGCGGTTTGGTGTTCTTTCAGTTCT 22833 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 1772 TCTCCGCAATTACACGCAAGAAAAAACCGCCATCAGGCGGCTTGGTGTTCTTTCAGTTCT 1831 Query 22834 TCAATTCGAATATTGGTTACGTCTGCATGTGCTATCTGCGCCCACAGCATCCAGTGGTCA 22893 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1832 TCAATTCGAATATTGGTTACGTCTGCATGTGCTATCTGCGCCCACAGCATCCAGTGGTCA 1891 Query 22894 TAGCAGTCGTTGATGTCCTCTGCTTCGATAACTCTGTTGAATGGCTCTCCATTCCATTCA 22953 ||||||||| |||||| ||| ||||||||||||||||||||||| ||||||||||||||| Sbjct 1892 TAGCAGTCGCTGATGTTCTCGGCTTCGATAACTCTGTTGAATGGTTCTCCATTCCATTCA 1951 Query 22954 CCTGTGACTCGGAAGTGCATTTATCATCTCCATAAAACAAAACCCGCCGTAGCGAGTTCA 23013 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1952 CCTGTGACTCGGAAGTGCATTTATCATCTCCATAAAACAAAACCCGCCGTAGCGAGTTCA 2011 Query 23014 GATAAAAGAAACCC 23027 ||||||||||| || Sbjct 2012 GATAAAAGAAATCC 2025 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 132554932182120