Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20deminutivum_20[genbank_20GCA_5F900092275.1_202017- 01-02] 13,382 sequences; 45,801,537 total letters Query= NC_019913.1 Length=91715 Score E Sequences producing significant alignments: (Bits) Value seq232 102 5e-17 >seq232 Length=384298 Score = 102 bits (112), Expect = 5e-17 Identities = 203/298 (68%), Gaps = 2/298 (1%) Strand=Plus/Minus Query 6949 GTCAGTCTTAGGGTCTTTGAAGATTGCAATGCCTTCTCCGTTCACCTCAGTGTAAGTGGC 7008 ||| || |||| |||||||||||||| | || || ||||| || || |||||| || Sbjct 86035 GTCTGTAATAGGATCTTTGAAGATTGCTCTTCCCTCACCGTTTACTTCTCCGTAAGTTGC 85976 Query 7009 TTTCACTGCGAACCCGAAGGTGTCTCGGGTATTGCACTGATAGGTGTAACTACCAACTCC 7068 ||||| ||| || || || || || || |||||| | ||||| ||| || |||| ||| Sbjct 85975 TTTCATTGCAAAACCAAAAGTATCACGTGTATTGTATTGATACGTGAAAGATCCAATTCC 85916 Query 7069 GAAGACCACGTTCAAGGATGCGAAACCTTTCTGCTTCAAGCGTTCCAAGATTTTAGCTGC 7128 || |||||||| || || ||||||||| || || | || |||||| || ||| Sbjct 85915 TAAAACCACGTTTGTAGAAGCAAAACCTTTCGCTTTTAATCTCTCGCAGATTTCAGTTGC 85856 Query 7129 -CCGGCGAGTTGTAATGGAATCCCCATAGATCAAACCGATATGAGAATCCAGCATCTTAT 7187 | || | ||||| ||| ||||| || ||||| || | | ||| || Sbjct 85855 TCTTGCTA-CGGTAATACTATCGCCATAAATTGCTCCGATTTGTGGAACCAATTCTTTGA 85797 Query 7188 AACCAGCTTCGTTCACAGTACCACCAAAGGTTTCCCAAAGAACTTGGATAGCACCTTT 7245 |||| ||||| || |||||||| |||||||| | || |||| | ||||| Sbjct 85796 AACCTTTATCGTTTGTCGTTCCACCAAAAACATCCCAAAGCAATTCGATAACTCCTTT 85739 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 293315354478952