Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20deminutivum_20[genbank_20GCA_5F900092275.1_202017- 01-02] 13,382 sequences; 45,801,537 total letters Query= NC_020837.1 Length=198013 Score E Sequences producing significant alignments: (Bits) Value seq3078 86.0 8e-12 seq126 86.0 8e-12 seq5 86.0 8e-12 >seq3078 Length=957 Score = 86.0 bits (94), Expect = 8e-12 Identities = 67/80 (84%), Gaps = 0/80 (0%) Strand=Plus/Plus Query 108518 TGGGCGATGAGGGAATCGAACCCCCGACCCTCTCCGTGTAAAGGAGGTGCGCTACCGCTG 108577 |||| | |||||| ||||||||||||||||||||||||||||||| || ||||||||| Sbjct 33 TGGGTGCTGAGGGTTTCGAACCCCCGACCCTCTCCGTGTAAAGGAGACGCTCTACCGCTG 92 Query 108578 CGCTAATCGCCCTGGCAGGC 108597 ||||| | ||| ||| || Sbjct 93 AGCTAAGCACCCCAGCAAGC 112 >seq126 Length=461790 Score = 86.0 bits (94), Expect = 8e-12 Identities = 66/76 (87%), Gaps = 3/76 (4%) Strand=Plus/Minus Query 108518 TGGGCGATGAGGGAATCGAACCCCCGACCCTCTCCGTGTAAAGGAGGTGCGCT--ACC-G 108574 ||||||||||||| ||||||||||||||| ||| ||||||| ||||||| || ||| | Sbjct 441807 TGGGCGATGAGGGGTTCGAACCCCCGACCCCCTCGGTGTAAACGAGGTGCTCTGAACCAG 441748 Query 108575 CTGCGCTAATCGCCCT 108590 ||| |||||||||||| Sbjct 441747 CTGAGCTAATCGCCCT 441732 Score = 86.0 bits (94), Expect = 8e-12 Identities = 66/76 (87%), Gaps = 3/76 (4%) Strand=Plus/Minus Query 108518 TGGGCGATGAGGGAATCGAACCCCCGACCCTCTCCGTGTAAAGGAGGTGCGCT--ACC-G 108574 ||||||||||||| ||||||||||||||| ||| ||||||| ||||||| || ||| | Sbjct 442037 TGGGCGATGAGGGGTTCGAACCCCCGACCCCCTCGGTGTAAACGAGGTGCTCTGAACCAG 441978 Query 108575 CTGCGCTAATCGCCCT 108590 ||| |||||||||||| Sbjct 441977 CTGAGCTAATCGCCCT 441962 >seq5 Length=514667 Score = 86.0 bits (94), Expect = 8e-12 Identities = 66/76 (87%), Gaps = 3/76 (4%) Strand=Plus/Minus Query 108518 TGGGCGATGAGGGAATCGAACCCCCGACCCTCTCCGTGTAAAGGAGGTGCGCT--ACC-G 108574 ||||||||||||| ||||||||||||||| ||| ||||||| ||||||| || ||| | Sbjct 79530 TGGGCGATGAGGGGTTCGAACCCCCGACCCCCTCGGTGTAAACGAGGTGCTCTGAACCAG 79471 Query 108575 CTGCGCTAATCGCCCT 108590 ||| |||||||||||| Sbjct 79470 CTGAGCTAATCGCCCT 79455 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633407629012560