Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20deminutivum_20[genbank_20GCA_5F900092275.1_202017- 01-02] 13,382 sequences; 45,801,537 total letters Query= NC_020858.2 Length=40929 Score E Sequences producing significant alignments: (Bits) Value seq7859 102 2e-17 >seq7859 Length=694 Score = 102 bits (112), Expect = 2e-17 Identities = 277/421 (66%), Gaps = 16/421 (4%) Strand=Plus/Minus Query 9789 TCATAGGCAACAGCCACCAGCCCGAAGGCGTCAGCGCCGTGACTTGACCAGTCATGGCTT 9848 || || || || |||| ||| ||||| || || | || ||| | ||| ||||| | Sbjct 430 TCGTAAGCCACTGCCATCAGACCGAATGCATCTGAGCTGTGCGACGCCCAATCATGCTCT 371 Query 9849 GGCCCTAAGCCGATGCCGCGTTCTTCGTCGCGCTTTTCGTGATACCAGCCGATCGCGTCC 9908 || || | ||| ||| || | | |||||||| ||||| |||||||| | ||||| Sbjct 370 GGGCCAAGGCCAATGTTTCGCACGGCATCGCGCTTCTCGTGGTACCAGCCCAATGCGTCG 311 Query 9909 AAGCCGGCCTCTGTCGTCGCTTGGTTGAACCACATGCTGGGGAATAGACGCCGTGCCGCC 9968 | || | || ||| ||| |||||||||||||||| ||||| || || || | || Sbjct 310 ATACCTGGCTGTGTTGTCTCTTGGTTGAACCACATCGAAGGGAACAGCCGGCGAGATGCT 251 Query 9969 TCTACGCGCTGCATTGCCGCACCCGCCCCTTGGTTCTTAACGACCTGCACTTCGAACCCT 10028 ||||| ||| |||||| || ||| ||||| ||| | ||| || | |||| Sbjct 250 TCTACTCGCAACATTGCTGCGCCCTTACCTTGATTCGGGATAACCGTGACGATGTACCCC 191 Query 10029 GCGGCCCGTAGTGCGCT--CTCGAATGATACGTCATGCACCTTGTCGTTAGTGCTGCCAT 10086 || ||| | | |||| | | || ||||||||||||||||| | || || | Sbjct 190 GCCGCC--TCATACGCTGAGCGGTAGGAAACGTCATGCACCTTGTCTTGTGTATCTCCGT 133 Query 10087 CGTGGGGCAATACGCAGA---GCG------CCGCCCCGTATCCGTTTGCCCGCAGCCACT 10137 |||| || | |||| ||| | | ||| || | || |||||||| | Sbjct 132 CGTGCGG---GAGCCAGATTTGCGCTCTATCTGGGGTGTAACCTTGTGATCGCAGCCAGT 76 Query 10138 CGATATGCGCCGCCAGAGGTTGCCCCTGCGCCTCGTAGTAGTTCAGCAGGCGAATTTCGC 10197 || ||||||| | | || || || ||| |||||| | |||||||| ||||| || | Sbjct 75 TGAGATGCGCCTCGATTGGCTGGCCTTGCTGCTCGTAATGGTTCAGCACCCGAATCTCCC 16 Query 10198 G 10198 | Sbjct 15 G 15 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 130830406272244