Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20deminutivum_20[genbank_20GCA_5F900092275.1_202017- 01-02] 13,382 sequences; 45,801,537 total letters Query= NC_021299.1 Length=80955 Score E Sequences producing significant alignments: (Bits) Value seq4593 410 6e-110 seq4225 98.7 5e-16 >seq4593 Length=590 Score = 410 bits (454), Expect = 6e-110 Identities = 370/463 (80%), Gaps = 4/463 (1%) Strand=Plus/Plus Query 59742 CTACCTGCCGATGTACTGGTCTAGTCG--GGGGAAGCTGACGAACACGGCCGACATGATC 59799 |||||||||||| || ||||| ||| || |||||||||||||||||||||| ||||| Sbjct 1 CTACCTGCCGATCTATTGGTC--CTCGAAGGCGAAGCTGACGAACACGGCCGACCTGATC 58 Query 59800 CGGCTCATCATTCGTGACGAGGCGGTGCACGGCTACTACATCGGATACAAGTTCCAGCGC 59859 || |||||||| || |||||||| |||||||| ||||||||||| |||||||||||| Sbjct 59 CGCCTCATCATCCGCGACGAGGCCGTGCACGGGTACTACATCGGCTACAAGTTCCAGAAG 118 Query 59860 GGCCTGGAGACTCAGAACGAGGCTCGCCGCGAGGAGCTGAAGGACTACACGTACGGTCTG 59919 ||||| |||| ||| | ||| |||||||| ||||| ||||||||||||| | || Sbjct 119 GGCCTCGAGAACGAGACCCAGGAGCGCCGCGATGAGCTCAAGGACTACACGTTCTCGCTC 178 Query 59920 CTACTCGAGTTGTACGACAACGAGATTGAGTACACGCAGGATCTGTACGACGGCGTGGGA 59979 | |||| | |||||||||||| | ||||||||||||| || |||||||| || || Sbjct 179 ATGTACGAGCTCTACGACAACGAGGTGCAGTACACGCAGGACCTCTACGACGGTGTCGGT 238 Query 59980 CTGACTGAGGATGTCAAGATGTTCCTGCGCTACAACGCCAACAAGGCGCTGATGAATCTC 60039 ||||| || || || |||| |||||||| |||||||||||||||||| || ||||| || Sbjct 239 CTGACCGAAGACGTGAAGAAGTTCCTGCACTACAACGCCAACAAGGCCCTCATGAACCTG 298 Query 60040 GGCTACGAGGCGCTGTTCCCGCGCGACGAAACCGAGGTGAATGCGGCGATCTTGGCGGCA 60099 |||||||||||| ||||||| | || || | ||||| |||||||| || ||||| Sbjct 299 GGCTACGAGGCGATGTTCCCCTCCAGCGTCACGAACGTGAACCCGGCGATCCTGTCGGCA 358 Query 60100 CTGTCCCCTGGCGGGGACGAGAACCACGACTTCTTCTCGGGCTCTGGCAGCACGTATGTG 60159 || || || || |||||||||||||||||||||||||| || ||| |||| || Sbjct 359 CTCTCGCCGAACGCCGACGAGAACCACGACTTCTTCTCGGGGTCAGGCTCGTCGTACGTC 418 Query 60160 ATTGGCAAGGCTGAGGTTACGGAAGACGAGGATTGGGACTTCT 60202 || |||||||| |||| ||||||||||| || |||||||||| Sbjct 419 ATCGGCAAGGCCGAGGCCACGGAAGACGACGACTGGGACTTCT 461 >seq4225 Length=585 Score = 98.7 bits (108), Expect = 5e-16 Identities = 108/144 (75%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 61684 ATCGCGGAGATGCCGTTCATCTACCCGCACCTGGCGCTGATGCCGGATGCCCACTCGGGC 61743 ||||| | | |||||||| || |||| ||||| |||||||||| | ||| ||| Sbjct 239 ATCGCCGCGGTGCCGTTCGTCGGCCCGTGGGTGGCGGTGATGCCGGACGTGCACGTAGGC 180 Query 61744 AAGGGATCTGCGGTCGGCACCGTCATCCCCACCAAGGGCGCTGTCATTCCGGCCGCTGTT 61803 || || | | || ||| | || ||||| ||| ||||| ||||||||||||| || Sbjct 179 AAAGGGGCCACCGTGGGCTCGGTGATCCCTACCCGCGGCGCGATCATTCCGGCCGCGGTC 120 Query 61804 GGGGTGGACATCGGCTGCGGCATG 61827 || ||||||||||||||||||||| Sbjct 119 GGCGTGGACATCGGCTGCGGCATG 96 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 258888970101432