Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20deminutivum_20[genbank_20GCA_5F900092275.1_202017- 01-02] 13,382 sequences; 45,801,537 total letters Query= NC_021560.1 Length=53102 Score E Sequences producing significant alignments: (Bits) Value seq136 140 1e-28 >seq136 Length=398197 Score = 140 bits (154), Expect = 1e-28 Identities = 197/274 (72%), Gaps = 2/274 (1%) Strand=Plus/Plus Query 31531 GTGCTGCCACTTGCGGGTTTGCAGCTTGCCCTCGATGTAAACCTTCGATCCCTTTTTCAG 31590 || ||||||||||||||| |||||| ||| || | ||||||||| ||||| || || Sbjct 368300 GTCCTGCCACTTGCGGGTCTGCAGCGCGCCTTCCAGATAAACCTTCATGCCCTTCTTGAG 368359 Query 31591 GTATTGCTCGCAAACCTTGACGAGACCTTCGGTGAAGACGACGACGCTATGCCACTCGGT 31650 ||| || || |||||| | || ||| |||| | ||||||||| ||||| ||||| Sbjct 368360 GTACTGTTCAGCCACCTTGGCCAGGTTGTCGTTGAAAATGACGACGCTGTGCCATTCGGT 368419 Query 31651 GCGCTCCTTGCGGTCGCCGCTGTCGCGGTCGCGCCAGCTTTCGGAAGTCGCAAGGCGAAG 31710 |||||||| |||||||||| ||||||||||||||| || || |||| ||| || Sbjct 368420 CTTTTCCTTGCGCTCGCCGCTGTTCTTGTCGCGCCAGCTTTCCGAGGTGGCAATGCGCAG 368479 Query 31711 GCTGGCGA-TGCTACCCCCGGCTTGTGTCTTTCGGATTTCCGGATCGGCGCCGAGATGGC 31769 || | | | | || | | | | |||| ||||||||| ||||| |||| | Sbjct 368480 ATTGACCACCGGATCGCCTGAACCGAGAC-GCCGGACTTCCGGATCAGCGCCAAGATTAC 368538 Query 31770 CGATAAGAATGACTTTGTTGACGCTACCGGCCAT 31803 ||| | ||| || |||||||| || || ||||| Sbjct 368539 CGACCAAAATTACCTTGTTGACACTGCCAGCCAT 368572 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 169777816106976