Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20deminutivum_20[genbank_20GCA_5F900092275.1_202017- 01-02] 13,382 sequences; 45,801,537 total letters Query= NC_021804.1 Length=28760 Score E Sequences producing significant alignments: (Bits) Value seq126 134 3e-27 >seq126 Length=461790 Score = 134 bits (148), Expect = 3e-27 Identities = 205/292 (70%), Gaps = 9/292 (3%) Strand=Plus/Minus Query 26387 GCATGGGATTAAATTATTGGTTGTTGATTACCTGCAGCTTATGACTGATAAA---AACTG 26443 ||| || ||||||||| | || |||| ||| ||||| | ||||||| | || | Sbjct 21009 GCACGGAATTAAATTAATTATTATTGACTACTTGCAGTTAATGACTGCCGGAGGAAATGG 20950 Query 26444 TAAAGGA------AATAGAGAGCAGGAAATTAGCGGTATATCAAGAAGGTTAAAAATGTT 26497 ||||||| || | |||||||| ||| ||| || ||| |||||| || Sbjct 20949 TAAAGGAGGAGGAAACCGTGAGCAGGAGATTTCGACTATTTCGCGAAACTTAAAAGCATT 20890 Query 26498 AGCTAAAGAACTGCAGGTGCCTATAATTGCTTTATGTCAATTATCTAGGGCTGTAGAAAC 26557 || ||||| || | || ||| ||||||| | | ||| ||||| | || || ||||| Sbjct 20889 GGCAAAAGAGTTGAACGTTCCTGTAATTGCACTTTCTCAGTTATCGCGTGCCGTTGAAAC 20830 Query 26558 TCGTGGTGGTTCTAAACGTCCTTTGTTATCAGATTTGCGTGAATCAGGTGCAATAGAGCA 26617 ||||| |||| | |||||| | || ||| | |||||||| || || || ||||| Sbjct 20829 CCGTGGATCAAGTAAAAGACCTTTGCTTTCGGATCTTCGTGAATCTGGAGCGATTGAGCA 20770 Query 26618 GGATGCAGATATAGTAGAGTTTATTTATAGACCAGATTATTATAAAATAGAA 26669 |||||| ||||| ||| |||||||||| | || || ||||||||||| ||| Sbjct 20769 GGATGCCGATATTGTATCGTTTATTTATCGTCCTGAATATTATAAAATTGAA 20718 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 91895794403448