Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20deminutivum_20[genbank_20GCA_5F900092275.1_202017- 01-02] 13,382 sequences; 45,801,537 total letters Query= NC_021806.1 Length=100418 Score E Sequences producing significant alignments: (Bits) Value seq57 134 9e-27 >seq57 Length=190050 Score = 134 bits (148), Expect = 9e-27 Identities = 194/272 (71%), Gaps = 4/272 (1%) Strand=Plus/Minus Query 96132 TTTAAAGCCTTCTTCTAGAATTTTCTGAGCTAATACTGTAGCTGTGGTTGTTCCATCTCC 96191 ||||| ||||||| || || ||||||||| |||||||| || || ||||| || || Sbjct 70477 TTTAAGACCTTCTTTTACGATAGCCTGAGCTAAAACTGTAGCAGTTGTAGTTCCGTCACC 70418 Query 96192 TACTTCTGTATTAGTATTCTCAGCTACTTGTTTAATCATTTGAGCACCTAAGTTTTCAAA 96251 || ||| || || |||||||| ||||| |||||| ||||| | ||||| || Sbjct 70417 CGCTAAATCATTGGTTTTAGAAGCTACTTCTTTAACCATTTGTGCACCCATATTTTCTAA 70358 Query 96252 TGGATCTTCTAAATGAATTTCTCTAGCCACACTTACACCATCTTTAGTAATGATTGG--A 96309 ||| |||| ||| | |||||| | || ||| |||||||||||||||| | |||| Sbjct 70357 TGGGTCTTTTAATTCGATTTCTTTTGCAACAGAAACACCATCTTTAGTAACGGTTGGTCC 70298 Query 96310 TTATACTGGTCTAAACCTAGTATAACATTCTTACCTGATGGTCCTAGAGTTACTTTAACT 96369 | || | | || | || || || |||| |||||| || |||||||| || Sbjct 70297 GCCAAATGATTT--TCCAATAATTACGTTACGACCTTTTGGTCCAAGTGTTACTTTTACA 70240 Query 96370 GCATTAGCTAAAGCATCTACACCTCTCTTTAA 96401 ||||| ||||| ||||||||||| | ||||| Sbjct 70239 GCATTTGCTAATGCATCTACACCACGTTTTAA 70208 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 321160412400658