Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20deminutivum_20[genbank_20GCA_5F900092275.1_202017- 01-02] 13,382 sequences; 45,801,537 total letters Query= NC_022066.1 Length=108297 Score E Sequences producing significant alignments: (Bits) Value seq8561 131 1e-25 seq236 91.5 1e-13 >seq8561 Length=961 Score = 131 bits (144), Expect = 1e-25 Identities = 209/295 (71%), Gaps = 5/295 (2%) Strand=Plus/Minus Query 95056 CCCACGGGCAGGAATAACCCGTCACCCATTCCCATGAGCTGCTCGGCTCCGCCCTCGTCC 95115 |||| ||| ||| | | |||||||| || ||||||| || || ||| || Sbjct 683 CCCATCGGCGAGAACAGCGCGTCACCCTGACCGATGAGCTTGTCCGCCCCGGGGCTATCG 624 Query 95116 AGGATCACCCGGCTATCGGTGAGTGATGCTGT-GGCGAACGAGAGCCTAGACGGCACGTT 95174 ||||| || ||||| ||||||| || || |||||| | || | |||||| ||||| Sbjct 623 AGGATGACGCGGCTGTCGGTGACAC-TGGTGACGGCGAAGGCCAGTCGAGACGGGACGTT 565 Query 95175 GGATTTGATAAGGCCTGTGACTACATCCACGGAGGGCCGCTGCGTCGCCAGGACGAGATG 95234 | ||||| || || ||||| || || ||| |||||||| ||||| |||||||| || Sbjct 564 CGCCTTGATGAGTCCGGTGACGACGTCGACGCTCGGCCGCTGGGTCGCGAGGACGAGGTG 505 Query 95235 AATACCGGCTGCGCGCGCCTTCTGGGCGATGCGGACAATGTTGGCCTCGACTTCTTTCTT 95294 || |||| || ||||| ||| | |||||| || || | |||| || || | Sbjct 504 GATGCCGGAGGCTCGCGCGAGCTGCGTGATGCGCACGATCGAGTCCTCCACGTCG--CGA 447 Query 95295 GTAGCCGCCCATCATGAGGTCTGCGAGTTCGTCGACCACTACCACGATGTAGGGG 95349 | || | ||||||||||||| ||||| ||||||||||| |||| || ||| ||| Sbjct 446 GGGGC-GACCATCATGAGGTCGGCGAGCTCGTCGACCACGACCAGGAGGTACGGG 393 >seq236 Length=280360 Score = 91.5 bits (100), Expect = 1e-13 Identities = 192/285 (67%), Gaps = 6/285 (2%) Strand=Plus/Plus Query 95367 GTGGCGCACGCCGGCTTCCTGCATCTGCCGGTACCGGTCATCCATCTCC---ACGGTGAG 95423 || |||||||||| | | ||||| ||||| ||||| ||||||||| ||||| Sbjct 83377 GTTGCGCACGCCGACCTTGGACATCTTGCGGTAGCGGTCTTCCATCTCCTTGACGGT--- 83433 Query 95424 CCACCGCAGCGTCTTAACCGCCTCGTCGGGCTCGGTGACCACCGGCTGCAAAAGGTGGGG 95483 ||| ||||| || |||| | || ||||| || || ||| | || || || Sbjct 83434 CCATTTCAGCGCTACGACGGCCTTCTTCGGATCGGTCACGACGGGCGTGAGCAGATGCGG 83493 Query 95484 GATACCGTTGTATGGGGTGAGTTCCACCATCTTCGGGTCGATCATGATGAGCTTGACCCG 95543 || |||| || | ||||||| ||||||||| ||||||||||| || | | | Sbjct 83494 AATGCCGTCATAGATCGACAGTTCCAGCATCTTCGGATCGATCATGATCAGGCGGCACTG 83553 Query 95544 ATCAGGATTGGCTCGGTAGAGCATGGAAACCAGCATCGAGTTGATGAAGCTGGACTTGCC 95603 || || | ||||| |||| || | | ||| | ||||||| ||| || || Sbjct 83554 TTCCGGGGTCATGCGGTAAAGCAGCGACAGGATCATGGTGTTGATGGCAACGGATTTACC 83613 Query 95604 CGATCCGGTGGCGCCAGCCACCAGCAGGTGGGGCATTTTGGCCAG 95648 ||| ||||||| || || |||||||| || ||||| || ||||| Sbjct 83614 CGAGCCGGTGGTACCTGCAACCAGCAGATGCGGCATCTTCGCCAG 83658 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346369100366316